Xanthomonas campestris pv. campestris B100: xcc-b100_1174
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Entry
xcc-b100_1174 CDS
T00759
Name
(GenBank) Holliday junction binding protein DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
xcc-b100_1174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xca03400
]
xcc-b100_1174
Enzymes [BR:
xca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
xcc-b100_1174
DNA repair and recombination proteins [BR:
xca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
xcc-b100_1174
RecFOR pathway proteins
xcc-b100_1174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
Mg_chelatase
AAA_22
TIP49
nSTAND3
AAA_14
Bac_DnaA
TsaE
AAA_2
AAA_33
NTPase_1
Rad17
RNA_helicase
NB-ARC
AAA_18
TniB
DUF815
AAA_17
AAA_24
Sigma54_activ_2
AAA_28
ABC_tran
ATPase_2
NPHP3_N
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
CAP50522
UniProt:
B0RPY7
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All DBs
Position
1355560..1356600
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AA seq
346 aa
AA seq
DB search
MTEQRTIASSATREDEAADASIRPKRLADYLGQQPVRDQMEIYIQAAKARGEAMDHVLIF
GPPGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPV
VEEVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSPQELTRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDFAQVKAAGH
IDLAVAQAAMQMLKVDPEGFDELDRRMLRTIVDHFDGGPVGVESLAASLSEERGTLEDVI
EPYLIQQGFLIRTARGRMVTPKAYLHLGLKPPRDRAPAIGEPGDLF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacagcgcaccatcgccagcagcgccacccgtgaggacgaggccgccgatgcg
agcatccgccccaagcgcctggccgattacctcggccagcagccggtgcgcgaccagatg
gagatctacatccaggcggccaaggcgcgcggcgaggcgatggatcacgtgctcatcttc
gggccgcccggcctgggcaagaccacgctcagccacgtcatcgccaacgaactgggcgtg
agcctgcgcgtcacctccggcccggtgatcgaaaaggccggtgatctggccgcgctgctg
actaacctacagccgcacgatgtgttgttcatcgacgagatccaccgcctttcgccggtg
gtggaagaagtgctgtatccggcgatggaagacttccagatcgacatcatgatcggcgac
ggcccggccgcgcgttcgatcaagatcgacctgccgccgtttacgctgattggcgcgacc
acccgcgcgggcctgctgaccgcgccgttgcgcgaccgctttggcatcgtgcagcgcctg
gagttctactcgccgcaggagctgacccggatcgtgatccgctcggcggcgatcctgggc
atcgactgcacgcccgatggtgccgccgagatcgcgcgccgcgcgcgtggtacgccgcgg
attgccaaccggctgctgcggcgggtgcgcgatttcgcccaggtcaaggccgccggccac
atcgaccttgcggtggcgcaggccgccatgcaaatgttgaaggtagacccggagggcttt
gacgagctcgaccgccgcatgctgcgcaccatcgtcgatcacttcgacggcgggccggtg
ggcgtggagtcgctggccgcatcgttgtccgaggagcgcggcacgctggaagacgtgatc
gagccctatctgatccagcagggcttcctgatccgcaccgcgcgcggccgcatggtcacg
ccgaaagcctatctgcaccttgggctgaaaccgccgcgcgaccgagccccagcaatcggc
gaacccggagacctgttctga
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