Xanthomonas campestris pv. campestris B100: xcc-b100_1345
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Entry
xcc-b100_1345 CDS
T00759
Symbol
pel1
Name
(GenBank) exported pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca00040
Pentose and glucuronate interconversions
xca01100
Metabolic pathways
xca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
xcc-b100_1345 (pel1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
xcc-b100_1345 (pel1)
Enzymes [BR:
xca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
xcc-b100_1345 (pel1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAP50695
UniProt:
B0RQG0
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All DBs
Position
1563578..1564639
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AA seq
353 aa
AA seq
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MTSKTLQGALALALSACAAGAIAGPVGYGAATTGGGNKVPVNVATFEAMQSAIDSYSGSG
GLVLNYTGKFDFGTIKDVCAQWKLPAKTVQIKNKSDVTIKGANGSAANFGIRVVGNAHNV
IIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDM
KKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRRGLSH
IYNNYFNNVTTSGINVRMGGIAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITW
GTPDGSKPYANATNWISTKVFPESLGYIYTVTPAAQVKAKVIATAGAGKNLAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactagcaaaacgcttcagggcgcactcgcgcttgcactgtccgcttgcgctgcgggc
gcgatcgcaggtccggtcggctacggtgccgccaccaccggcggcggcaataaggttccg
gtgaatgtggccacgttcgaggcgatgcagtcggccatcgacagctactccggcagcggc
ggcctggtgctgaactacaccggcaagttcgacttcggcaccatcaaggatgtctgcgcg
cagtggaagctgcccgccaagaccgtgcagatcaagaacaagagcgatgtcaccatcaag
ggtgccaacggctcggctgccaacttcggtattcgcgtggtgggcaatgcgcacaacgtg
atcatccagaacatgaccatcggtctgttgcagggcggcgaagatgccgattcgatttcg
ctggaaggcaactccagtggcgagccgtccaagatctgggtcgaccacaacacggtattc
gcctcgctcaccaagtgctccggcgccggtgatgcctccttcgatggcggcatcgacatg
aagaagggcgtgcatcacgtcaccgtgtcctacaactacgtctacaactaccagaaggtg
gcgttgaacggttacagcgacagtgacaccaagaactcggccgcgcgtaccacctaccac
cacaaccgcttcgagaatgtggaatcgcgcgtgccgctgcagcgccgtggcttgagccac
atctacaacaactacttcaacaacgtcaccacctccggcatcaatgtacgcatgggcggc
attgccaagatcgagtccaattacttcgagaacatcaagaacccggtgacctcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgtcggcagcggcatcacctgg
ggcacgcccgatggcagcaagccctacgccaatgccaccaactggatcagcaccaaggtg
ttccccgaatcgctgggctacatctacacggtcacgccggctgcgcaggtcaaggccaag
gtgatcgccaccgcaggggcgggcaagaacctggccgagtga
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