Xanthomonas campestris pv. campestris B100: xcc-b100_1616
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Entry
xcc-b100_1616 CDS
T00759
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xca03016
]
xcc-b100_1616
Enzymes [BR:
xca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
xcc-b100_1616
Transfer RNA biogenesis [BR:
xca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
xcc-b100_1616
Prokaryotic type
xcc-b100_1616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAP50966
UniProt:
B0RR81
LinkDB
All DBs
Position
1862757..1863530
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AA seq
257 aa
AA seq
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MRYALGVEYDGSEFQGWQQLGEHGGPSVQATLQAALSSVADAPIQVVCAGRTDAGVHGEC
QVVHFDSDARREPRGWMLGTTARLPPSVAVRWCVPAAEDFHARFSARARRYRYRLLNRQI
RPALYRQTLSWERRPLDAQAMHTAAQALLGENDFGAFRSVQCQALHARRNLQAITVQRLG
EVVEVQVQANAFLHHMVRNIVGSLILVGTGEQPIDWIATLLAGRDRTVAGPTAPPQGLVF
IGPLYPAEWHLPAEVTQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgcgctgggcgtggaatatgacggcagcgagttccagggctggcagcaactg
ggcgagcacggcgggccaagtgtgcaggcaaccctgcaggcggcattgtcgtcggtggcc
gatgcgccgatccaggtggtctgtgccggccgcaccgatgccggcgtgcatggcgaatgc
caggtggtgcatttcgacagcgatgcccgccgcgaaccgcgcggctggatgctgggcacc
accgcgcggctgccgccctcggtggcggtgcgctggtgcgtgccggcagccgaggacttc
catgcgcggttttccgcgcgggcgcggcgctaccgctatcgcctgctcaaccggcagatc
cgcccggcgctgtaccggcagaccctgagctgggagcgccggccgctggatgcgcaggcc
atgcacaccgccgcgcaggcattgctgggcgagaacgacttcggcgcatttcgcagcgtg
caatgccaggccctgcatgcgcggcgcaatctgcaggccatcaccgtgcagcggctgggc
gaggtggtggaggtgcaggtgcaggccaatgcattccttcatcacatggtgcggaatatt
gttggctcgctgattttggtcgggaccggtgaacagccgatcgactggatcgcgacattg
ctcgccggacgcgaccgcactgtggccggcccgacggcaccgccgcaaggcctggtgttc
atcgggccgctgtatcccgcagagtggcatctgcccgccgaggtgacccaatga
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