Xanthomonas campestris pv. campestris B100: xcc-b100_1618
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Entry
xcc-b100_1618 CDS
T00759
Symbol
trpI
Name
(GenBank) transcriptional regulator, LysR family
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xca03000
]
xcc-b100_1618 (trpI)
Transcription factors [BR:
xca03000
]
Prokaryotic type
Helix-turn-helix
LysR family
xcc-b100_1618 (trpI)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CAP50968
UniProt:
B0RR83
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Position
complement(1864446..1865342)
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AA seq
298 aa
AA seq
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MPTSLPPLAALRAFEAAARLQSVSRAADALHVTHGAISRHVRSLEQLLGTALFTRQGRGL
VLTAAGTRLRDATSEGFALIADTWADLASPRNEAPLVLGCSGSLLARWVIPRLGRLQRDL
PDLRVHLSANEQPPGPDLDGLDAALLLDTPPWPGDWQVHELGVEWIGPVLSPQSPLATQL
AGQPPHALLAHPLLHTRSRPQAWPDWAQAHGIPADSLRFGTEFEHLMYLLEAAAAGLGVA
IAPQSLVAADLAAGRLVAPWGFTPTRGRWGLCAARRNPDPRIAQLAGWLRGELAADQP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccacctccctgcccccgcttgctgccttgcgcgcctttgaggccgcggcgcgcctg
caaagtgtcagccgcgccgccgacgccctgcacgtgacccacggtgccatcagccggcat
gtgcgttctctggaacagctattgggcaccgccctgtttacccgccagggccgcgggctg
gtgctgaccgccgccggcacgcgcctgcgcgatgccaccagcgagggctttgcgctgatc
gccgacacctgggcggacctggccagcccgcgcaacgaggcgccgttggtgctgggctgc
tccggcagcctgctggcgcgctgggtgattccgcggctgggccggctgcagcgcgatctg
cccgatctgcgcgtgcatctgtcggcaaacgagcaaccgcccgggccggacctggacggc
ctggacgccgcgctgctgctcgacaccccgccctggccgggcgactggcaggtgcacgag
ctgggcgtggagtggatcgggccggtgctcagcccgcaaagcccgctggcgacccagctg
gccgggcagccgccgcacgcactgctggcgcacccgctgctgcatacccgttcacgcccg
caagcctggccggactgggcgcaggcgcatggcatcccggccgacagcttgcgcttcggc
actgagttcgagcatctgatgtatctgctggaagccgctgcggccggactgggcgtggcg
atcgcgccgcaatcgctggtcgccgccgacctggcggccgggcggctggtggcgccgtgg
ggctttaccccgacccggggccgctggggcctgtgcgcggcgcggcgcaatcccgatccg
cggatcgcacagcttgccggctggttgcgcggcgagcttgcggcggatcagccctga
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