KEGG   Xanthomonas campestris pv. campestris B100: xcc-b100_1855
Entry
xcc-b100_1855     CDS       T00759                                 
Name
(GenBank) ATP-dependent DNA helicase Lhr, probable
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xca  Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:xca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xca03400]
    xcc-b100_1855
Enzymes [BR:xca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     xcc-b100_1855
    5.6.2.6  RNA 3'-5' helicase
     xcc-b100_1855
DNA repair and recombination proteins [BR:xca03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    xcc-b100_1855
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 DUF5805 HTH_9 PhoH AAA_25 DUF3258
Other DBs
NCBI-ProteinID: CAP51208
UniProt: B0RRX3
LinkDB
Position
2170630..2175024
AA seq 1464 aa
MHPVLQHFHPVVAAWFGRTFAAPTPAQIAAWPAIKAGRHALVAAPTGSGKTLTAFLAAID
ALIRDGLAQGGALPDQTRVIYVSPLKALSNDIHLNLEAPLQGIRAELLAQGLTDVPVRTA
VRTGDTPQRERAQARRVPPHILVTTPESLYVLLGSASGRNALRHVRTVIVDEIHAVAADK
RGSHLALTLERLQRLAEQPITRVGLSATQKPIDTVAQFLVGVGEDGAAPPCEIVDIGYTR
QRDLALALPPTPLSVVLSNDQWLQVYAEVAALAQQHRTTLVFVNTRRMAERAARHLGELL
GKQRVAAHHGSLSRETRLLAERRLKAGELTVLVATASLELGLDIGDVDLVCQLGSSRSIA
TFLQRAGRSGHAVGGTPKARVFPQTRDELVECAALLDGIRRGELDALRFPLAPIDVLAQQ
IVAEAACEDWDEDALFALVRRAWPFATLSRATFDAVVRMLCEGFSTRLGSRAGYLHRDAV
NRRLHARRGARMTALTSGGTIPETGDYSVVLEPQAENIGTVNEDFAVESLTGDVFQLGNA
SYRILRVDAGKVRVEDAKGAPPNIPFWLGEAPGRSDALSLAVSRLREEIATRLDGARHAS
AQAWLCDEVGLAAEPAQQLVEYLANACQALGAMPTQHCLVMERFFDATGGTQLIIHSPYG
SRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTSHSFALEEVARYLHSASAEHVL
VQALLDAPLFGVRWRWNATNAMALPRFSGGNKVAPQLQRMKSEDLLATVFPDQVACAENL
VGEREVPDHPLVAQTLEDCLHQSMDSEGWLQVLRGLESGAITLVARDLAAPSPLAAEALN
ARPYAFLDDAPLEERRTQAVQGRRYTPQSSDDLGQLDPQAIAAVREEAWPQPRDAEEMHE
ALVGLGVLPVEEALDAQWQAWLSALSAAGRATCLAVDGGTALWISAERIEWFAPLYPHAV
AQPPLQAPPDCRVDDWQREWAVRELVRGRLSAVGPAQVSALCSAVRLPAAEVELALIGLQ
REGYVMAGRFSAQALEEEWCERHLLARIHRYTLGRLRREIEPVSQRDYARFLFEWQHLDA
DHRVAGPDALAGIVGQLEGFEAPAALWESELLPARVRDYQPAWLDELCTAGRTVWARLRP
GGGRSGNALRGTPIVLLPRREAQRWNALARADDDAPLGSRAQRVVEVLQEQGALFFDEIA
DAARLMATELEDALSELVMRGRVHCDSYAGLRALLVPASKRPSALSRQRRRASALGIRDA
GRWAPVRNLPSLPLAEASERHQEMLEHVARALLRRYGVVCWRLLEREAAWLPPWRELLRV
YQRLEARGELRGGRFIAGVSGEQFALPDAIAAMRRVRAQPLAQQWICLSASDPANLLGNL
LPGERIARVPGNRVAFLDGLPMAAWSGDRFQPLQELSHEHGEQALRLLQRGPGAAEQTPL
QQWLAQSPVTDARAPLTRGSGRDR
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgcatccagtcctgcagcattttcatcccgtggtcgccgcctggttcgggcgtaccttt
gctgcgcccaccccggcgcagatcgccgcgtggccggcgatcaaggccgggcggcatgcc
ctggtggcggcgccgaccggctccggcaagacccttaccgcatttctggcagcgatcgat
gcgttgatccgtgacggcctggcccagggcggtgcgctgccagaccaaacgcgggtgatc
tacgtctcgccgctcaaggccttgtccaatgacatccatctgaatctggaggcgccactg
cagggcatccgtgcggagttgctggcgcagggcctgaccgatgtgccggtgcgtacggcg
gtgcgaaccggcgacacgccgcagcgcgagcgggctcaggcgcggcgtgtgccgccgcat
attctggtgaccacgccggagtcgctgtacgtgctgctgggctcggcttccgggcgcaac
gcgttgcgccatgtgcgcacggtgatcgtggacgagatccacgcagtggcagccgacaag
cgcggcagccatctcgcattgaccctggagcgcctgcagcggttggccgagcagcccatc
acgcgggtgggtctgtctgccacgcagaagccgatcgacaccgtggcgcagtttctggtg
ggtgttggcgaggacggcgcggcgccgccgtgcgagatcgtggatatcggttacacccgt
caacgcgatctggcattggcgctgccgcccacgccgttgagcgtggtgctgtccaacgac
caatggctgcaggtgtatgccgaggtcgctgcgctggcgcaacagcaccgcaccacgctg
gtgttcgtcaacacgcggcgcatggccgagcgggctgcgcgccacctgggcgagctgctg
ggcaagcagcgcgtggcggcgcatcacggcagcctgtcgcgcgagacgcggctgctggcc
gagcgccgactcaaggccggcgaattgaccgtgctggtggccactgcgtcgctggagctg
ggcctggatatcggcgatgtggacctggtctgccaactcggctcatcgcgctcgatcgcc
accttcctgcagcgcgctggccggtccgggcatgcggtcggcggcacaccgaaagcgcgg
gtgttcccgcagacgcgcgacgagctggtcgaatgcgccgcgctgctggatggcatccgc
cgtggcgaactggatgcgctgcggtttccgctcgcgccgatcgacgtgctggcgcagcag
atcgtcgccgaagccgcctgcgaagattgggacgaagatgcactgtttgcgttggtgcgc
cgcgcctggccattcgcaacgctgagccgcgccaccttcgatgcggtcgtgcggatgtta
tgcgagggcttcagcacccggctggggtcacgcgctggctatctgcaccgcgatgcggtc
aatcgccgcctgcatgcgcggcgtggcgcgcgcatgaccgcgctcacctccggcggcacc
attcccgaaaccggcgattacagcgtggtgctggagccacaggcggaaaacatcggcacg
gtgaacgaggatttcgcggtcgaaagcctcaccggcgatgtcttccagcttggcaatgcg
agctaccgcatcctgcgcgtggatgcgggcaaggtgcgggttgaagatgccaagggggcg
ccgcccaatattccgttctggttgggcgaggcgccaggccgcagcgatgcattgtcgctg
gcggtatcgcgcctgcgcgaagaaattgccacgcggctcgacggtgcacggcatgcctcc
gcacaggcatggctatgcgacgaggttgggttggccgcggagccggcgcagcaactggtg
gagtacctggcgaacgcctgtcaggcattgggtgcgatgccgacccagcactgcctggtg
atggagcggttcttcgatgccaccggcggcacccaattgatcatccactcgccctacggc
agccggatcaaccgcgcctggggcctggccttgcgcaagcggttctgccgcaccttcaat
ttcgaattgcaggccgccgcgaccgaggacgcgatcgtattgtcgctgtccaccagccat
agttttgcgctggaagaggtggcgcgttatctgcattccgcatcggccgagcacgtgctg
gtgcaggcgttgctggacgcaccgctgttcggtgtgcggtggcgctggaatgccaccaac
gcgatggcgctgccgcgcttttccggcggcaacaaggttgcgccgcaactgcagcggatg
aagtccgaagacctgttggccacggtgttcccggaccaggtggcatgtgcggagaatctg
gttggcgagcgcgaggtgccggaccatccgctggtggcgcaaacgctggaagattgcctg
catcaatcgatggatagcgagggttggctgcaggtgttgcgcggcctggagtccggcgcc
atcacgctggtggcacgtgatctggccgcgccgtcgccgctggcggcggaagccttgaat
gcacgtccgtacgcctttctcgacgatgcaccgctggaagagcggcgcacccaggcggtg
cagggcaggcgctacacgccgcagagcagcgatgatttgggacagctggatccgcaggca
attgctgccgtgcgcgaagaagcctggccgcagccacgcgatgccgaagagatgcatgag
gcgctggtgggcctgggtgtgttgccggtggaagaggccctcgatgcacagtggcaggca
tggctgtcggcgttgtcggcggccgggcgcgccacctgcctggcagtcgatggcggcact
gcactgtggatcagcgccgagcgcatcgagtggtttgcaccgttgtatccgcacgccgtg
gcgcagccgccgctgcaggcgccgccggattgccgtgtggacgactggcagcgcgagtgg
gcagtgcgcgagctggtgcgcggccgcctgtcggcggtggggccggcgcaggtgtctgcg
ctgtgcagcgcagtgcgcctgccggcagcggaggtcgaactcgccttgatcgggctgcag
cgcgaaggctatgtcatggcaggtcgcttcagtgcccaggcacttgaagaggaatggtgc
gagcggcatctactggcgcgcatccatcgctatacgctggggcgcttgcgccgtgagatc
gagccggtgtcgcagcgcgattacgcacgtttcctgttcgaatggcagcacctggatgcc
gaccaccgcgtggccgggccggacgcgctggccggcatcgttggccagctggaaggcttc
gaggcgccggccgcgctctgggaaagcgagctgttgcccgcgcgcgtgcgtgactaccaa
cccgcgtggctggacgaactgtgcaccgctggccgcacggtatgggcgcgcctgcgtcca
ggcggtggccgcagtggcaatgcgttgcgcggcacgccaatcgtgctgctgccgcggcgt
gaagcgcagcgctggaatgccctggcacgcgccgacgatgacgcgccgctgggctcgcgt
gcgcagcgcgtggtggaggtgctgcaggagcagggcgcgctgttcttcgacgagattgcc
gatgctgcgcggctgatggccaccgagctggaagatgcgctcagcgaactggtgatgcgc
gggcgcgtgcattgcgacagttatgccggcctgcgtgcactgctagtgccggcgtccaaa
cgcccctcggcactgtcgcggcaacgccggcgtgccagtgcgttgggcatccgcgatgcc
ggccgttgggcgccggtgcgcaacttgccgtcgctgcccttggccgaggccagcgagcgt
caccaggaaatgctggagcacgtggcgcgcgcgttgctgcgccgctatggcgtggtgtgt
tggcggctgcttgagcgcgaggccgcctggctgccgccctggcgcgaattactgcgtgtg
tatcagcggttggaagcgcgtggcgaactgcgtggtgggcgttttattgccggcgtgtcc
ggcgaacaattcgcgttgcccgatgccattgccgcgatgcgtcgagtacgcgcgcaaccg
ttggcgcaacagtggatctgcctcagcgcaagtgacccggccaatctgctcggcaatctg
ttgcccggcgaacgcatcgcgcgcgtgcctggcaatcgcgtggcgtttttggatggccta
ccgatggccgcctggagcggcgatcgcttccagccgctgcaagagctctcacacgagcac
ggcgagcaggcattgcgattgctgcaacgtgggccgggcgccgccgagcagacgccactg
cagcaatggctcgctcagtcgccggttactgatgcgcgtgcgccgctcacacgtggcagc
ggacgcgacagatag

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