Xanthomonas campestris pv. campestris B100: xcc-b100_1872
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Entry
xcc-b100_1872 CDS
T00759
Name
(GenBank) unnamed protein product
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xca03016
]
xcc-b100_1872
Enzymes [BR:
xca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
xcc-b100_1872
Transfer RNA biogenesis [BR:
xca03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
xcc-b100_1872
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
CAP51225
UniProt:
B0RRZ0
LinkDB
All DBs
Position
complement(2189248..2190336)
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AA seq
362 aa
AA seq
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MPHWITHPSELTERLQLRPSRIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGMT
DALKDWLVAPDIVKVMHSASEDLVTFKCACGVLPRPLFDTQIAAALAGVGGGMGYQKLVQ
EVTGTLLTKGETRSDWMRRPLSPAQLEYAADDVRYLFAIHDALTAKLTAQDRLGWLAEDG
ERLLGTVEHDDGDRWPHVSLRTAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILDNEL
ASQLARFPPADLDALMRQFDKFPKAPRKLANAVWEALNTPLPDEDHAPLAQASTDGNKAT
LKRLQDAVAQRSRELELPDGILASRRHLETLIEQRGWPAALGQWRRDALEADLLPLLDAA
TP
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
gtgccccattggatcacccacccctccgaattgaccgaacgcctgcaattgcgtccgtcc
cgcattggcctggataccgaattcattcgcgagcgcacctattggccgcaactggcgctg
gtgcagatggcgatcggtgaggagatcctgctgatcgacccgttgattccgggcatgacc
gatgcactgaaggactggctggtcgcgccggacatcgtcaaggtgatgcacagcgccagc
gaagatctggtcaccttcaagtgtgcctgcggcgtgctgccgcggccgttgttcgacacc
cagatcgcggccgcactggccggcgtcggtggcggcatgggctatcagaaactggtgcag
gaagtcaccggcaccctgctcaccaagggcgagacccgctcggactggatgcgccgcccg
ctctcgcccgcacagctggaatacgccgccgacgacgtgcgctacctgtttgccatccac
gacgcgctcaccgccaagctgaccgcgcaagaccgcctgggctggctggccgaagatggc
gagcgcttgctcggcacggtggagcacgacgatggcgaccgttggccgcacgtgagcctg
cgcaccgcacagtttctggaaccggccgcacagcgccgcctgctgcgcctgttgcgctgg
cgcgacctgcaggcacggcagagcgatcgtccacgcagctggatcctggacaacgaactg
gccagccagctggcgcgcttcccgccagcggatctggacgcactgatgcgccagttcgac
aaatttcccaaggcaccgcgcaagctcgccaacgcggtctgggaggcgctcaacacgccc
ttgcccgacgaagaccacgctccgctggcgcaggcctccaccgatggcaacaaggccacg
ctcaagcgcctgcaggatgcagtggcgcagcgcagccgcgagctcgaactgccggacggc
atccttgcctcgcgccgccatctggaaaccctgatcgaacagcgcggctggccggccgcg
ctcgggcagtggcgacgcgacgcattggaagcagatctgctgccgctgctggatgcggca
acgccctga
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