Xanthomonas campestris pv. campestris B100: xcc-b100_1899
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Entry
xcc-b100_1899 CDS
T00759
Name
(GenBank) Ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xca03019
]
xcc-b100_1899
03016 Transfer RNA biogenesis [BR:
xca03016
]
xcc-b100_1899
Enzymes [BR:
xca01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
xcc-b100_1899
Messenger RNA biogenesis [BR:
xca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
xcc-b100_1899
Transfer RNA biogenesis [BR:
xca03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
xcc-b100_1899
Prokaryotic type
xcc-b100_1899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
CAP51252
UniProt:
B0RS17
LinkDB
All DBs
Position
complement(2220603..2221256)
Genome browser
AA seq
217 aa
AA seq
DB search
MRRGKLHPITCAVPQFLGCTPCTMPRLLRREPGVPFPAATFKVDTVARRHTWSLIRHGCG
CLFRFGPPMRKPALLIVAIVLLVAGLWVMRVVQTPKPQFAPQLSAPVAAAPAVTSARQVP
RLPAFLPTEAMATIVLIQRGGPFPYPQDGAVFGNREQRLPERPRGYYHEYTVDTPGSADR
GARRIVTGGTPPQSWYYSDDHYANFKSFQGPTPEQAP
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcgagggaaacttcatcccatcacctgcgcagtgccgcagttcctcggctgcaca
ccttgcaccatgccccggttacttcggcgtgaaccgggcgtgcccttccccgccgccacg
ttcaaagtcgacacagtcgcgcgacggcatacttggtctctcatccgccatggctgcggt
tgcctctttcgcttcggaccacccatgcgcaaacccgccttgctgatcgtcgccatcgtc
ctgcttgtggccgggctctgggtcatgcgtgtcgtgcagacgcccaagccgcagttcgcc
ccgcaactgtcggcacctgtggctgccgcaccagccgtaacgtcggcgcgccaggtgccg
cggctgccggcattcctgccgaccgaagccatggcaaccatcgtgttgatacaacgcggc
gggccgtttccgtatccgcaggacggcgcggtgttcggcaatcgtgagcagcggctgccg
gaacggccgcgcggctattaccacgagtacaccgtggacacgcccggcagcgcagatcgc
ggcgcacgccggatcgtcaccggcggcacgccgccgcagagctggtactacagcgacgat
cactacgccaatttcaaatccttccagggccccaccccggagcaggcaccatga
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