Xanthomonas campestris pv. campestris B100: xcc-b100_1966
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Entry
xcc-b100_1966 CDS
T00759
Name
(GenBank) putative pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xca03009
]
xcc-b100_1966
Enzymes [BR:
xca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
xcc-b100_1966
Ribosome biogenesis [BR:
xca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
xcc-b100_1966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
CAP51319
UniProt:
B0RS84
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All DBs
Position
complement(2290182..2291798)
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AA seq
538 aa
AA seq
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MSDTPRKLSLNKLSLKRDSAPEAPKLEERLHKVLAQAGLGSRRALEQRIADGLIKVNGAV
AQTGMSVRSGDKIELDGRSFVASALTESSRVLVYNKPEGEVTTREDPEGRPTVFESLPAL
KGSRWIAIGRLDINTTGLLLLTTDGELANAMMHPSYEVEREYVVRVRAPEGEEKVPDSMI
ERLSRGVLLEDGGAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKVSLPRELLRGQSVELAQEKVDALRAELKLEEGAPSALTLQPVIGQRRAAKSTVHVS
RDGRSNAYVNGQTSGADEGRELRRFDNLREDRGGRGGRGKPGGFKGGLTVSGEAAAKQSQ
QRPFKQRGPAKGDRSLPDGNPAAFRSWYVPDGVSTGPSGHRNAGPGGAGTGQPRPYAKKG
PGGARPGAGGQGRGAAGGQGQSQGQGQGQRKHPYGHPGNAPSFPSDHANPGFSPYGAARP
AAGRPTGARAGGPGGNRGPGGNRGPGGPGGAPRGPGGPGGRPPGGGNRRPPGGGNRGR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgcaagctgtcgttgaacaagctttccctcaagcgcgacagcgcg
cccgaagcgccgaaactggaagagcgcctgcacaaggtgctggcccaggccggcctgggc
tcgcgccgcgcgctggagcagcgcattgccgatggcctgatcaaggtcaatggcgccgtc
gcgcagaccggcatgtcggtgcgcagcggcgacaagatcgaactggacggccgcagcttc
gtcgccagcgcgctgaccgaatcctcgcgcgtgctggtctacaacaagcccgaaggcgaa
gtgaccacccgcgaagatcccgaaggccgcccgaccgtattcgagtcgctgccggcgctg
aagggctcgcgctggatcgctatcggccgcctggacatcaacaccaccggcctgctgctg
ctcaccaccgatggcgagctggccaacgcgatgatgcacccctcctacgaggttgaacgc
gagtacgtggtgcgcgtgcgcgccccggaaggcgaagagaaggtgcccgacagcatgatc
gagcggctttcgcgcggcgtgttgctggaagacggcggcgccaagttcgacgagatcgaa
cgtatcggtggcaccgattcgcacgactggttccgcgtggtggtcaaggaaggccgtaac
cgcgaagtgcgccgcctgtgggagtcgcaaggctgccaggtcagccgcctcaagcgcacc
cgctacggcaaggtgtcgctgccgcgcgagctgttgcgcgggcaatcggtggaactggca
caggaaaaggtcgacgccctgcgcgccgaactcaagctggaagaaggcgcgccgtcggca
ttgacgctgcagccggtgatcggccagcgccgcgccgccaagtcgaccgtgcacgtgtcg
cgcgacggccgcagcaatgcctacgtcaacggccagacctccggcgccgatgaaggccgt
gagttgcgccgcttcgacaacctgcgcgaggatcgcggcggccgtggtggccgcggcaag
cccggcggcttcaagggcggcctgacggtcagcggcgaagccgctgccaagcaatcgcag
cagcgcccgttcaagcagcgtggcccggccaagggcgaccgctcgctgccggacggcaac
ccggccgcgttccgcagctggtatgtgcccgatggcgtgagcaccggcccgagcggccac
cgcaacgcaggtcccggcggcgccggcaccggccagccgcgtccctacgccaagaagggt
ccgggcggcgcacgcccgggcgcaggcggccagggccgcggcgcggcaggtgggcaaggt
cagtcgcagggtcaaggtcagggccagcgcaagcacccctacggccacccgggcaacgcg
ccgagcttcccgtccgatcacgccaacccgggtttcagcccgtatggtgccgcacgtccg
gcagctgggcgcccgaccggtgcgcgtgcaggcggccccggcggcaaccgtggaccaggc
ggtaatcgtggtcccggtggtccgggcggcgcaccgcgtggcccaggtggtccgggtggt
cgtcccccgggtggcggcaaccgtcggccaccaggtggcggcaatcgcggtcgctaa
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integrated database retrieval system
