Xanthomonas campestris pv. campestris B100: xcc-b100_1987
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Entry
xcc-b100_1987 CDS
T00759
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xca03032
]
xcc-b100_1987
03036 Chromosome and associated proteins [BR:
xca03036
]
xcc-b100_1987
03400 DNA repair and recombination proteins [BR:
xca03400
]
xcc-b100_1987
DNA replication proteins [BR:
xca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
xcc-b100_1987
Chromosome and associated proteins [BR:
xca03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
xcc-b100_1987
DNA repair and recombination proteins [BR:
xca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
xcc-b100_1987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CDC48_2
PTS-HPr
HU-CCDC81_euk_2
VWA_3
DUF7177
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CAP51340
UniProt:
B0RSA5
LinkDB
All DBs
Position
2315833..2316144
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AA seq
103 aa
AA seq
DB search
MTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDMVDAAD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgatcgaaatcctggcgcgacgccaagcgcatctgaagtcggac
gatgtggatctggcggtcaagtcgctgctggaaatgatggggcaggccttgtccgatggt
gatcggatcgaaatccgtgggtttggcagcttctcgctgcattaccgcccgccacgcctg
ggccgcaacccgaagaccggtgaatcggtcgcgctgcctggcaagcatgttccgcatttc
aaacccggcaaggagctgcgcgagcgcgtgagctcggtggtgccggtcgacatggtggat
gcagcggactga
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