Xanthomonas campestris pv. campestris B100: xcc-b100_2555
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Entry
xcc-b100_2555 CDS
T00759
Name
(GenBank) tRNA pseudouridine synthase D, probable
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xca03016
]
xcc-b100_2555
Enzymes [BR:
xca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
xcc-b100_2555
Transfer RNA biogenesis [BR:
xca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
xcc-b100_2555
Prokaryotic type
xcc-b100_2555
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
RST
Motif
Other DBs
NCBI-ProteinID:
CAP51915
UniProt:
B0RU01
LinkDB
All DBs
Position
complement(2964392..2965495)
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AA seq
367 aa
AA seq
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MSDSPVLPRAHGAAVLTAAMRSVAEDFQVDELPAFDASGEGEHLLLSVRKRGQNTAYVAK
RLAQWAGIAEMGIGYAGLKDRHAVTTQRFSVHLPKRIAPDLSALDDDDMQVVEHTWHNRK
LQRGALHGNRFVLTLREVVGDQTAIDARLHAIAARGIPNWFGEQRFGRDGGNVAAALAMF
GYTRQLDGTLAPAPKRRLRNDQRSLLLSAARSALFNQVLTARVEQGDWDAPLDGEAWMLD
GSRSVFGPEPWSEVLAERLARFDIHPSGPLWGAGELRCSADAAAIEQAALSDPQSLALRT
GLEAAGLKQERRALRLRPQALAHAWLDAQTLQLTFALPPGCYATAVLWELGDVVDAARVA
PQSRSEG
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcacccgttttgccgcgcgcgcatggcgccgcggtgctcactgcggcaatg
cgcagcgttgccgaggatttccaggttgatgagttgcccgcgttcgatgcatcgggtgaa
ggcgagcatctgctgctgagcgtgcgcaagcgtggccagaacaccgcttacgtggccaag
cgtttggcgcagtgggccggcattgcggagatgggcattggctacgcgggtctgaaggac
cgccacgcggtgaccacgcaacgcttcagcgtacatctgcccaagcgcatcgccccggac
ctgagcgcgctggacgatgacgacatgcaggtggtggagcacacctggcacaaccgcaag
ctgcagcgcggcgccttgcatggcaatcgtttcgtgctgacgctgcgcgaggtggtgggc
gatcagacggccattgatgcgcgcctgcacgcgatcgccgcgcgcggcatccccaactgg
tttggcgagcagcgcttcggccgcgatggtggcaatgtcgccgcggcattggcgatgttc
ggttacacgcggcagctggatggcacgctcgcgcccgcacccaagcgtcgcctgcgcaac
gatcaacgctcgctgctgctgtcggcagcacgctcggcactgttcaaccaggtgctgact
gcgcgcgtggaacagggcgattgggatgcgccactggacggcgaggcctggatgctggac
ggctcacgcagcgtgttcggtcccgaaccctggagcgaggtgttggccgagcgtctggcg
cgtttcgacattcatcccagcggcccgttgtggggcgccggcgaattacgctgcagcgct
gatgccgcggcgattgaacaggcggcactgtcggatccgcaatcgcttgcgttgcgcacg
ggcctggaagcggccggcctcaagcaggagcgccgcgcgttgcggctgcgtccgcaggcg
ttggcacatgcctggttggacgcgcagacgctgcagctcaccttcgccttgccaccgggc
tgctacgcaactgcggtgttgtgggaactgggcgatgtcgtcgatgcagcgcgcgttgca
ccgcagtcgcgttccgagggctga
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