Xanthomonas campestris pv. campestris B100: xcc-b100_3190
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Entry
xcc-b100_3190 CDS
T00759
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
xcc-b100_3190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xca03400
]
xcc-b100_3190
DNA repair and recombination proteins [BR:
xca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
xcc-b100_3190
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
xcc-b100_3190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
RsgA_GTPase
nSTAND1
AAA_25
DnaJ_CXXCXGXG
AAA_21
nSTAND3
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
CAP52555
UniProt:
B0RY35
LinkDB
All DBs
Position
3641785..3644751
Genome browser
AA seq
988 aa
AA seq
DB search
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGFPLEAQTVSQMVDHMLTLDPEQRYMLLAPVIRDRKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLD
DAAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVLFGSGDEVISF
TYFTDAGGRTTRKHRFEGILPNLERRYRETESPAVREELTKYVSQQPCPACNGTRLNRAA
RNVFVADRPLPELVVLPVNEALNFFRGLSLPGWRGEIASKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADHVLDIGPGAGVHGGEICAQGTLQDILESPRSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLEIPAGLLTCITGVSGSGKSTLINDTLFTLA
ANEINGASHTVAPHREVENLDLFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVP
ESRARGYSPGRFSFNVRGGRCEACQGDGMIKVEMHFLPDVYVPCDVCHGKRYNRETLEIR
YKGFNISDVLQMTVEDALRLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVSGTPEDVAAHKASYTGQFLAKMLPSVKARETRPAAMANKPDA
RPPRKVKPEKVAKAAKTPIKKTAKKKAS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgac
ctcgacctgcctcgcgacaaattgatcgtgatcaccggcctgtccggctcgggcaagtcg
tcgttggcgttcgacaccatctatgcagaaggccagcgccgctacgtcgagtcgctgtcg
gcgtatgcgcgccagttcctcagcgtgatggaaaagccggacctggaccatatcgaaggg
ctgtcgccggccatctcgatcgagcagaagtccacctcgcacaacccgcgctccacggtc
ggcacgatcaccgagatctacgactacctgcgcctgctgtacgcgcgcgtgggccagccg
cgctgcccggatcatggcttcccgctggaggcgcagaccgtcagccagatggtcgaccac
atgctcacactggacccggagcagcgctacatgctgctggcaccggtgatccgcgaccgc
aagggcgagcacgcgcaggtgttcgaacaactgcgtgcgcagggcttcgtgcgtgtgcgc
gtggatggcgagttgtacgagatcgatgcggtgccgccgctggcgctgcgccagaagcac
accatcgaagcggtgatcgaccgcttccgcccgcgtgaagacatcaagcagcgactggcg
gaaagcttcgagaccgcgctcaagctcggcgaaggcatggtcgcagtgcagtcgctggac
gatgccgccgccgcgccgcatctattttcgtccaagtacagctgcccggtctgcgattac
tcgctaccggagttggaaccgcgcctgttctcgttcaacgcgccggtcggtgcctgcccg
agctgcgatggcctgggcgtggccgaattcttcgacccggaccgcgtggtggtgcatccg
gagctgtcgttgtcggccggcgcagtgcgcggctgggatcggcgcaatgcctattatttc
cagttaattgcctcgctggccaagcactacaagttcgacgtggatgcggtgtggaacacg
ttgccggccaaggtgcgccaggcggtactgttcggcagcggcgatgaggtgatcagcttc
acctacttcaccgacgcgggcgggcgcaccacgcgcaagcatcgcttcgaaggcatcctg
ccgaacctggaacgccgctaccgcgagaccgaatcgccggccgtgcgcgaagagttgacc
aagtacgtcagccagcagccctgccctgcctgcaacggcacgcgcctgaatcgcgctgcg
cgcaacgtctttgtggccgaccgcccgttgccggaactggtggtgctgccggtcaacgaa
gcgctgaactttttccgcggattgtcgctgccgggttggcgcggcgagattgccagcaag
atcgtcaaggaaatcggcgaacgacttggctttttggtcgacgtgggcctggattacctc
accctggaacgcaaggccgacaccttgtccggtggcgaagcacagcgcatccggttggcc
agccagatcggtgcgggcctggtcggcgtgatgtacgtgctcgacgaaccctcgatcgga
ctgcatcaacgcgacaacgagcgcctgctcggcacgctgacgcgactgcgcgacctgggc
aatacggtgatcgtggtcgaacatgacgaagacgccattcgcctggccgatcacgtgctg
gacattggccctggcgcgggcgtgcacggcggtgaaatctgcgcgcagggcacgctgcaa
gacatcctcgagtcgccacgttcgctgaccggccaatacctgtcgggcaagcgccgcatc
gagattcccaagcaacgccacaagcccaacccgaagatgatgctgcatctgcgcggggcc
accggcaacaacctgaaaaatgtggacctggagattccggccggcctgctgacctgcatc
accggcgtgtccggttcgggtaagtcgacgttgatcaacgatacgttgttcacactggcg
gccaacgagatcaacggtgcatcgcacacggtggcaccgcatcgcgaagtggaaaatctg
gacctgttcgacaaggtggtggacatcgaccagtcgccgatcgggcgcacaccgcgctcc
aacccggcgacgtacaccggcatgttcactccgctacgcgagctgttcgcgcaggtgccg
gaatcgcgtgcacgcgggtattcgccgggccgcttcagcttcaatgtgcgcggcggccgc
tgcgaggcctgccagggcgacggcatgatcaaggtggagatgcacttcctgcccgacgtg
tatgtgccgtgcgatgtctgccatggcaaacgctataaccgcgagacattggagatccgg
tacaagggcttcaacatcagcgacgtgttgcagatgacggtggaagacgcgctgcggctg
ttcgagccggtgccgtcgatcgcgcgcaagctggaaaccttggtggacgtgggcctgagc
tacatcaagcttggccagagcgcgaccacgttgtccggcggtgaagcgcagcgtgtgaag
ctgtccaaggaactgtcgcgccgcgataccgggcgcaccttgtacatcctggacgagccc
accaccggcctgcacttccacgacatcgaagcgctgctcggcgtgctgcacaagctgcgc
gacgagggcaacacggtggtggtgatcgaacacaatctggacgtgatcaagacggccgat
tggatcgtggatcttgggccggaaggcggccaccgcggcggcaccatcctggtctccggc
acgccggaagatgtggccgcgcacaaggcctcctacaccgggcagttcctggccaagatg
ctgccgtcggtgaaggcacgcgaaacccgcccggcggcgatggccaacaagcctgatgcg
cggccaccgcgcaaggtcaagccggagaaggtggccaaggccgccaagacccccatcaag
aagactgcgaagaagaaggcaagctga
DBGET
integrated database retrieval system
