Xanthomonas campestris pv. campestris B100: xcc-b100_3710
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Entry
xcc-b100_3710 CDS
T00759
Symbol
pel2
Name
(GenBank) exported pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca00040
Pentose and glucuronate interconversions
xca01100
Metabolic pathways
xca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
xcc-b100_3710 (pel2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
xcc-b100_3710 (pel2)
Enzymes [BR:
xca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
xcc-b100_3710 (pel2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
CAP53077
UniProt:
B0RVI6
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All DBs
Position
complement(4210467..4211609)
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AA seq
380 aa
AA seq
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MSTASTVVGRTVVGVVLGAALLSGTAYAADPALEVATTGWATQNGGTKGGSKAAAADIYT
VTNAAQLKAALKAKAGSNGRIIKIKGVIDISEGKAYTKTSDMKSRGRLDVPTKTSLIGVG
TNAEIREGFFYVKANDVIVRNLTIENPWDPEPVWDADDGDAGNWNSEYDGLTVEGASNVW
VDHVTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANYVTISYSVFKSHEKNSLIGSSD
SASSTDSGKLKVTIHNTLFQDIAARAPRVRFGQVHLYNNYHVGSTSNKVYPFSHAHGVGK
ESKIFSENNAFDISGVSSCTKIAGDYKGSVYRDQGSLINGKALTCSWNSNIGWKPPYTYN
ILPANKVAADVKAKAGAGKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgcatcgacagttgtgggtcgtacggttgtgggcgtcgttctgggcgctgcg
ttgttgtcgggcaccgcgtatgcggcagaccctgcactggaagtggccaccaccggctgg
gccacccagaacggcggcaccaagggaggctccaaggcggcggcggcagacatttacacc
gtcaccaacgcggcccagctcaaggcggccttgaaggccaaggccggcagcaacggccgc
atcatcaagatcaagggtgtcatcgacatcagcgaaggcaaggcctacaccaagacctcg
gacatgaagagccgtggtcgcctggatgtgccgaccaagaccagcctgatcggcgtcggc
accaatgccgaaatccgcgaaggctttttctacgtcaaggccaacgacgtcattgtgcgc
aatctcaccatcgagaatccgtgggatccggagccggtgtgggatgccgacgacggcgat
gcaggcaactggaactccgaatacgacgggttgaccgtggaaggcgccagcaacgtgtgg
gtggaccatgtgaccttcaccgacggccgccgcaccgatgatcagaacggcaccgccaac
ggccgccccaagcagcatcacgatggtgcgatggacgtcaagaagggcgccaactacgtg
accatttcgtattcggtgttcaagtcgcacgagaagaacagcctgatcggctccagcgac
agtgcatcgagcaccgactccggcaagctcaaggtcaccatccacaacaccttgttccag
gacattgccgcacgtgcgccgcgtgtacgcttcggccaggtgcatctatacaacaactac
cacgtcggcagcaccagcaataaggtgtacccgttctcgcatgcgcatggcgtgggcaag
gaatcgaagatcttctccgagaacaatgccttcgacatcagcggcgtgagcagctgcacc
aagattgccggcgactacaagggcagcgtgtaccgcgatcagggctcgttgatcaacggc
aaggcactgacctgcagctggaacagcaacatcggctggaagccgccgtatacctacaac
attctgccggccaacaaggtggcagcggacgtcaaggccaaggctggcgccggcaagctg
taa
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