Xanthomonas campestris pv. campestris B100: xcc-b100_3734
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Entry
xcc-b100_3734 CDS
T00759
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca00521
Streptomycin biosynthesis
xca00523
Polyketide sugar unit biosynthesis
xca00525
Acarbose and validamycin biosynthesis
xca00541
Biosynthesis of various nucleotide sugars
xca01100
Metabolic pathways
xca01110
Biosynthesis of secondary metabolites
xca01250
Biosynthesis of nucleotide sugars
Module
xca_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
xcc-b100_3734 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
xcc-b100_3734 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
xcc-b100_3734 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
xcc-b100_3734 (rmlB)
00525 Acarbose and validamycin biosynthesis
xcc-b100_3734 (rmlB)
Enzymes [BR:
xca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
xcc-b100_3734 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAP53101
UniProt:
B0RVL0
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All DBs
Position
complement(4235528..4236583)
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AA seq
351 aa
AA seq
DB search
MATWLVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIG
DGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPD
TRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAID
ASKLKDELGWEPAYTFEQGIALTVDWYLTNQTWVQGVLDGSYRLERIGATV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacttggctagtaaccggcggggccggcttcatcggcggaaattttgttctggag
gcggtctctcgcgggatccgcgtggtcaatctggacgcgctcacttatgcgggcaatctg
aatacgctggcgtcgctggaaggcaatgccgaccatatcttcgtcaagggcgacatcggt
gatggagcgcttgtgactcgcttgctgcaggaacatcagccggacgcggtgctgaacttt
gcagccgaaagccatgtcgatcgctcgatcgaaggccctggcgccttcatccagaccaat
gtggtcggcactttggccctgctcgaggcagtgcgcgactattggaaagcactgccggac
acgcgccgtgatgccttccgcttcctgcatgtgtccaccgacgaggtctatggcacgctc
ggtgagaccggcaagttcaccgaaaccacgccgtatgcgcccaattcgccgtactcggcg
tccaaggcggcatcggatcatctggtgcgcgcgtttcaccacacctacgggctgccggtg
ctgaccaccaactgctcgaacaactacggtccgtatcacttccccgaaaaactcattccg
ttggtcattgccaaggcgctggctggcgagccgctgccggtctatggcgatggcaagcag
gtgcgcgactggttgttcgtcagcgaccactgcgaggcgatccgcaccgtgctggccaag
ggccgggtcggcgagacttacaacgtgggcggcaattcggagcggcagaacatcgaggtc
gtgcaggcgatctgcgcgctgctggatcagcatcgcccgcgcgaagatggcaagccgcgt
gagagccagatcgcctacgtcaccgaccgccccgggcacgatcgtcggtatgcgatcgat
gcctccaagttgaaggacgagctgggctgggagccggcgtacaccttcgagcagggcatc
gcattgacggtggactggtatctgaccaaccaaacctgggtccaaggcgtgctggatggt
agctatcgactggaacgcatcggcgcaacggtttaa
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