Xanthomonas campestris pv. campestris B100: xcc-b100_3936
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Entry
xcc-b100_3936 CDS
T00759
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xca03032
]
xcc-b100_3936
03400 DNA repair and recombination proteins [BR:
xca03400
]
xcc-b100_3936
Enzymes [BR:
xca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
xcc-b100_3936
DNA replication proteins [BR:
xca03032
]
Prokaryotic type
DNA Topoisomerases
xcc-b100_3936
DNA repair and recombination proteins [BR:
xca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
xcc-b100_3936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
HC2
Motif
Other DBs
NCBI-ProteinID:
CAP53303
UniProt:
B0RWR4
LinkDB
All DBs
Position
4452787..4455282
Genome browser
AA seq
831 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKN
EKHVEAIARAAKSADDIYLATDPDREGEAISWHIAEILKERGLLKDKTMQRVVFTEITPR
AIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIDAHCRHPSQPFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLSDDERRLYELIWRRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVAGFLAVYEEGKDTKSSEDEDEGRKLPLMKAGDNIPLDRIVTDQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGADPVSGKE
VSARIGRFGPMVQIGTVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQDKDQDV
SVGIGRFGPFARRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRVIKEFDGSDIQV
LNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTGKPVRKGFGAKKATLKKNAVK
DSAKEAKDAAKKTAAVKKVATKTAAKKAPAKKAAKKATKRVVKKAVSKAAG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgtgacctggttcccaag
gagggcgccgtggatccggacaacgggtttgcgatgcgctacgacttgatcgaaaagaac
gaaaagcacgtggaggcgattgcccgggctgccaagagcgccgacgacatctatctggcg
accgacccggaccgcgagggtgaggcgatcagctggcatatcgccgagatcctgaaagag
cgcgggctgctgaaggacaagacgatgcagcgggtggtcttcaccgagatcacgccccgc
gcgatcaaggaagccatgctcaagccgcgcgcgatcgccgccgacctggtggacgcgcag
caggcacgccgtgcgctggattacctggtcggtttcaacctctcgccggtgctgtggcgc
aaggtgcagcgcgggctgtcggccggccgcgtgcagtcgccggcgctgcgcatgattgtc
gaacgtgaagaagaaatcgaagccttcatcgcgcgcgaatactggtccatcgatgcgcac
tgccggcatccctcgcagccgttcaatgcgcgcctgatcaagctggacgggcagaagttc
gaacaattcaccgtcaccgacggcgataccgccgaggcggcgcgcctgcgcatccagcag
gccgcgcaaggcgtgctgcacgtcaccgatgtggccagcaaggagcgcaagcgtcgccct
gccccgccattcaccacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaaactctatgaaggcgtagcgctcggcgacgaa
ggctcggtcggtctgatcagctatatgcgtaccgactcggtgaacctgtcgcaggacgca
ctggcggaaatccgcgacgtgatcgcgcgcgatttcggcaccgcctcgctgccggatcag
cccaacgcctacaccaccaaatccaagaacgcgcaggaagcgcacgaagcggtgcgcccg
acctcggcattgcgcacgccggcacaggtggcgcgcttcctgtctgatgacgagcgccgt
ttgtatgaattgatctggcgccgcgcagtggcgtgccagatgattccggccacgctcaat
accgtcagcgtggatctgtcggccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtggcgggctttctggccgtgtacgaagaaggcaaggacaccaagagcagcgaa
gacgaggacgaaggccgcaagctgccgctgatgaaggccggcgacaacatcccgctggac
cgcatcgtcaccgatcagcatttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtcaaagcgctggaggaatacggcatcggtcggccgtccacctacgcttcgatcatccag
accctgcagttccgcaagtacgtggaaatggaaggccgcagcttccgcccgaccgacgtg
ggccgtgcggtgtccaagttcctgtccgggcacttcacccgctacgtggactacgacttc
accgccaatctggaagacgatctggatgcggtctcgcgcggcgaagccgagtggatcccg
ttgatggagaagttctggggcccgttcaaggaactggtcgaggacaagaaggattcgctg
gacaagaccgacgccggcagcgtgcgcgtgcttggcgccgacccggtcagcggcaaggaa
gtcagtgcgcgtatcggccgcttcgggccgatggtgcagatcggcacggtcgaagacgaa
gacaagcccacctttgcctcgttgcggccgggccagagcatctattcgatctccattgaa
gatgcgctggaactgttcaagatgccgcgcgccctgggccaggacaaggaccaggacgtc
agcgtcggtatcggccgcttcgggccgtttgcccgccgtggcagcgtgtatgcgtcgctg
aagaaagaggacgacccgtacaccatcgatctggcgcgggcggtgttcctgatcgaagag
aaggaagagatcgcgcgtaaccgggtgatcaaggaattcgacggcagcgacatccaggtg
ttgaacgggcgctttggcccgtacatcagcgacggcaagctcaacggcaagattcccaag
gaccgcgagcctgcctcgttgaccttcgaggaagtgcagcagctgctagccgacaccggc
aagccggtgcgcaagggctttggcgccaagaaggccacgctcaagaagaatgcggtgaag
gattccgccaaggaagccaaggacgcggccaagaagacggcggcggtcaagaaagtcgcc
accaagaccgcagccaagaaggcgcctgcgaagaaggccgccaagaaggcgaccaagcgc
gtggtcaagaaagccgtcagcaaggcggctggctga
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