Xanthomonas campestris pv. campestris B100: xcc-b100_4219
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Entry
xcc-b100_4219 CDS
T00759
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca03420
Nucleotide excision repair
xca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
xcc-b100_4219
03430 Mismatch repair
xcc-b100_4219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xca03400
]
xcc-b100_4219
Enzymes [BR:
xca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
xcc-b100_4219
DNA repair and recombination proteins [BR:
xca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
xcc-b100_4219
MMR (mismatch excision repair)
Other MMR factors
xcc-b100_4219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
DUF6825
InPase
Motif
Other DBs
NCBI-ProteinID:
CAP53588
UniProt:
B0RYQ2
LinkDB
All DBs
Position
complement(4763071..4765242)
Genome browser
AA seq
723 aa
AA seq
DB search
MLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK
AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR
VVQSLELDETKYPPKQMGWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS
GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGHVF
VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI
GKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE
EALIAEQLPYRVYGGMRFFERAEIKDALAYLRMLTNRSDDAAFERAVNTPTRGIGDRTLD
EVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLQAETGEMDLAERIDHV
LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL
EAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY
VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTASLGAAR
GGPVHAVVDAAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAYANL
TVV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgcgccgccggggcattac
cttgtgctggccggcgccggctccggcaagacgcgcgtgctgatccatcgcattgcctgg
ctcaatgaagtccagggcgtgccaaaccacggcatcttcgcggtgaccttcaccaacaag
gccgccggcgaaatgcgccaccgcaccgacctgcaactgcgcaacggcagccgcgggatg
tggatcggcaccttccatgggctggcccatcgcctgctgcgcctgcactggcaggacgcg
cggctgccggaaggcttccaggttatggacagcgacgaccagctacggctggtcaagcgc
gtggtgcagtcgctggagctggacgagaccaagtatccgcccaagcagatgggctggtgg
atcaacgagcagaaggacgaaggccgccgcccgcaacacatccagcccgagcccaacgac
gactggaccgaggtgcgccggcaggtgtacgccgcctaccaggaacgctgcgaccgctcc
gggctgctggatttcgccgagctgctgctgcgcgcgcacgaattactgcgcgacaccccg
gccttgctggcgcattaccgcgcgcgcttccgcgaaattctggtcgacgagttccaggac
accaacgccatccagtacgccttcgtgcgcgtgctggccggcgagagcggccacgtattc
gtggtgggcgacgacgaccaggccatctacggctggcgcggtgccaaggtcgagaacgtg
cagcgcttcctcaaggatttccccggtgcgcagacggtgcggctggagcagaactaccgg
tccagcgccaatattctgggcgcggccaatgcggtgatcgcgcataaccccgaccgcatc
ggcaagcagttgtggaccgattccggcgatggcgacccgatcgatctgtacgcggcctac
aacgaagtcgacgaggcccgctatgtagtcgagcgcgcgcgccagtgggtgcgcgatggc
ggcagctatggcgaagtggcggtgctctatcgcagcaatgcgcaatcgcgcgcgctggaa
gaagcactgattgccgaacaactgccgtaccgcgtgtatggcggcatgcgctttttcgaa
cgcgccgaaatcaaggacgcgctggcgtacctgcgcatgctcaccaaccgcagcgacgat
gcggcgttcgagcgcgcggtcaacacgcccacgcgtggcattggcgatcgcaccctggat
gaagtgcgccggctggcacgcgccaatgcgctgtcgctgtgggaagcggcaatgctgtgc
acgcaggaaaacaccctggcggcgcgtgcacgcaatgcactggctacgttcctgagcctg
gtcggccagctgcaggccgaaaccggcgagatggacctggccgagcgcatcgaccatgtg
ctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgcggtgggctggattcg
gaatcgcgcaccgagaacctggacgaactggtctcggtggcctcgcgcttcacccgcccg
gacgatgaagacagccagggcatgaccgaactggtggccttcctcgcctacgcctcgctg
gaagccggcgaaggccaggcgcaggccggcgaagaaggcgtgcagctgatgacgttgcac
tcggccaagggcctggaatttccgatcgtgttcctggtcgggctggaagatggcctgttc
cccagcgcacgctcgctggaagaaagcggccggctcgaagaagaacgccgcctggcctac
gtgggtatcacccgcgcgcgccagaaactggtgctgtgctacgccgaatcgcggcgcatc
cacggccaggacaactacaacgtgccgtcgcgctttctgcgcgagatcccgcgcgacctg
ctgcatgaagtgcggcccaaggtgcaggtctcgcgcactgcctcgctgggcgccgcacgc
ggcggcccggtacacgccgtggtcgacgccgcgccgatcaagctcggcgccaatgtcgaa
caccccaagttcggtggcggcgtggttgtcgactacgaaggcgccggcgcgcatgcacgc
gtgcaggtgcaattcgatgaagtgggcgccaagtggctggtgatggcgtacgcgaatctg
acggtggtgtag
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