Xanthomonas campestris pv. campestris B100: xcc-b100_4419
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Entry
xcc-b100_4419 CDS
T00759
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
xcc-b100_4419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xca03400
]
xcc-b100_4419
Enzymes [BR:
xca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
xcc-b100_4419
DNA repair and recombination proteins [BR:
xca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
xcc-b100_4419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
AAA_11
AF-4
Motif
Other DBs
NCBI-ProteinID:
CAP53792
UniProt:
B0RMH9
LinkDB
All DBs
Position
complement(5011365..5015483)
Genome browser
AA seq
1372 aa
AA seq
DB search
MSNSPVTDPYLHLPLHGVRLIEASAGTGKTFTLATLFTRLVVERQLRIGQILAVTFTEAA
TQELRRRIRERLALAATLVPDARAGAAATEAQTTLLPDASSAGVGAALAATEPSQTQTTD
APSPAIGTALPATAPANHPSHPHAQDAPDAILTRAILTAHLATGTETPSALRRRLQQAVE
EIDLAAIFTIHGFCARVLREHALESGQAFAAPQLLANDRELLGEVAADLWRQRAADAAMA
DDLVALWPAGPTALASDLRALVQQPELLPAVAAPTPDPQPARQAAAQAVVAALRAHGDAA
YDAVAAAFEHKIFDGRRARRPSFDKAFEQLWQGSAEAHWVLDDGGHLDKLLPQRLREFCK
DGAHDRVPCSPLFDALAVWQQADAVVRQWEGQRRIRLLHALRDDAVLQLAQRKRQRRVQT
YDDLVDGVARALQGPQAEALVQRLRAQYAIALVDEFQDTDDRQWQIFSRVFGPEHAASGE
AFAPDDDADFDNAAGAPPPRLLALIGDPKQAIYGFRGGDVQTYLAAATTAQRAPPLEHNF
RSRPGVLAAIDALYAQAGYAEAFLTEGIAFHPVQPGTKRSDADLLRDGAAAPALTLWRAP
APPPPEKGKPKPWSAGRARELCTAACVAAIRGWLAGGRDGSASINGRPVQAGDIAVLVRS
HGEATRIQQALGAVGIPAVAAGKQSLFATDEALELLALLQALLDPGDDSRLRAALATVLI
GEDAAAIAALEHDGERHRRWQQQALDWRERWQRGGPLALVGDLGATHGQRLLALVDGERR
LTNYLQLAELLQEADTRALGPHGLVDWLARRIANADDNDETQQLRLESDARRVQIVTLHK
SKGLEYPLVFLPYIGIGRADKSPGRHCVVHAPPHGRQLHWNTSKWSADDTASWSTAETAW
KHEQRAEDARLLYVGLTRAEHALWIATGAFHQHERTALAPMLRDPAALQASAGAGVIALD
DTAPPATLPRLPADDAVQVPAARLAQRHVVPDWWVYSFTQLANADAGSDPMASATLASSG
GSDEPPASEPVSAPAEVEAFDPRFAGNRFGVAMHDVFERCDFAAWRNWCPGQPAPEGQAA
AILEALQRGGYAQDELDDGLAMLTRLVGHTLTVTLPEGTCLAAVPEPQRRNEMEFHFAMR
PTRVDALLALLHRFGVVTERQAFGARQRLEGLMTGLIDLTYCADGRWYVLDYKSNRLPAY
DPDALARAMAHSEYELQALIYTIALHRWLRFRLGASYDYARDFGGVRYLFCRGLDAARNP
AADSSSILGSGSGSDSDSDSDSDSDSDSDSVNGASSVSGSDPASDAMSDTPAPNTPVPGI
YAWRFDPALVQALDALFAGNPTEPLSSDALKPLSPRERGWGEGTSTTGTPTP
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagccccgtgaccgacccgtacctgcacctgccactgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagaccttcaccctggccacgctgtttacgcggctg
gtggtggagcggcagctgcgcatcggccagatcctggcggtgacctttaccgaagccgcc
acccaggagctgcgccgccgcatccgcgagcgcctggccctggccgccaccctggtcccc
gacgcccgcgcaggcgcggccgcaaccgaagcgcagacaacgctgctgcccgacgcctca
tcggctggtgtaggagcggccttggccgcgaccgaaccttcccagacgcagacgaccgat
gcgccatcacctgcgatcggcacggccctgcccgcgaccgcacctgctaaccacccatcg
cacccacacgcgcaggacgcacccgacgccatcctcacccgcgccatcctcaccgcacac
ctggccaccggcacggagactccctccgcgctacgccgccgcttgcagcaggcggtggaa
gaaatcgacctggcggccatcttcaccatccacggcttttgcgcgcgcgtgctgcgcgaa
cacgcgctggaaagcggccaggcctttgccgcgccgcaactgctggccaacgaccgcgaa
ctgctcggcgaggtggccgccgacctgtggcggcagcgcgctgccgatgccgccatggcc
gacgatctggtggcgctgtggccggccggccccaccgccctggccagcgacctgcgcgcg
ctggtgcagcagcccgaactgctgcccgccgtcgccgcgccaacgccggacccgcagccc
gcgcgccaggccgccgcgcaggccgtggtggccgcattgcgtgcgcatggcgatgccgcc
tacgacgcggtggctgctgcgttcgagcacaagattttcgatggccgccgcgcgcgccgc
cccagtttcgacaaggccttcgagcaactgtggcagggcagtgccgaggcgcattgggtg
ctggacgacggcggccatctggacaaattgctgccgcagcgtctgcgcgaattctgcaag
gacggcgcgcacgaccgcgtgccgtgctcgccgctgttcgacgcgctcgccgtgtggcaa
caggccgatgcagtggtgcgccagtgggaagggcagcgccgcatccgcctgctgcatgcg
ctgcgcgacgatgccgtgctgcagctggcgcagcgcaagcgccagcgccgcgtgcagacc
tacgacgacctggtcgatggcgttgcccgggcattgcagggcccgcaggccgaggcgctg
gtgcagcggctgcgcgcgcaatacgccattgcgctggtggacgaattccaggacaccgac
gaccgccagtggcagatcttctcgcgtgtgttcgggcctgagcacgctgcctccggcgag
gccttcgcgccggacgatgatgcggatttcgacaacgctgccggcgccccgccgccgcgc
ctgctcgccttgatcggcgaccccaagcaggccatctacggcttccgcggcggcgacgtg
cagacctatctggccgcagccaccaccgcacaacgcgcgccgccgctggagcacaacttc
cgctcgcgtcccggcgtgctggcggccatcgacgcgctgtacgcgcaggccggttatgcc
gaggccttcctcaccgagggcatcgcgtttcatccggtgcagccgggcaccaaacgcagc
gacgccgatctgctgcgcgatggcgccgccgccccggcgctcacgctgtggcgcgcgcct
gcgccgccaccgccggagaaaggcaaacccaaaccctggagcgccggccgcgcgcgcgag
ctgtgcaccgctgcctgcgtggcggccatccgcggttggctggccggtggccgcgacggc
agcgccagcatcaacggccgcccggtgcaggccggcgacatcgcggtgctggtgcgtagt
catggcgaggccacgcgcatccagcaagcgctgggcgcggtgggcattcctgcggtggcg
gccggcaagcagagcctgttcgccaccgacgaagcactggaactgctcgccttgctgcag
gccttgctcgacccgggcgacgacagccgcctgcgtgccgcgctggccaccgtgctgatc
ggcgaagacgccgccgccattgccgccctcgaacacgacggcgagcgtcatcgccgctgg
cagcagcaggcgctggactggcgcgaacgctggcagcgcggcggcccgttggccctggtc
ggcgatctgggggccacgcatgggcaacgcctgctggccctggtcgatggcgaacgccgt
ctcaccaactacctgcaactggccgagctgctgcaggaagccgacacccgcgcgctcggc
ccgcacggcctggtcgactggctggcacgccgcatcgccaatgccgacgacaacgacgag
acccagcagctgcggctggaatcggacgcgcgccgcgtgcagatcgtcaccctgcacaag
agcaagggcctggaataccccctggtgttcctgccgtacatcggcattggccgtgccgat
aaaagcccgggccgccattgcgtggtgcacgcgccaccgcatggccgccagctgcactgg
aacacctccaaatggagcgccgacgacaccgccagctggagcaccgccgagacggcgtgg
aagcacgaacagcgcgccgaagacgcgcgcctgctctacgtcggcctgacccgcgccgag
cacgcgctgtggatcgccaccggtgctttccaccagcacgagcgcaccgcgctggcgccg
atgctgcgcgacccggccgcactgcaggccagcgccggtgcaggggtgatcgccctcgac
gacaccgcgccgccggccacgctgccgcgcctgcccgccgacgacgcggtgcaggtgccc
gccgcgcggctggcgcagcgccacgtggtgccggactggtgggtctacagcttcacccag
ctggccaatgccgacgccggcagcgacccgatggccagcgccacgctcgccagcagtggc
ggcagcgacgaaccgccggccagcgagccggtgagcgcgcccgccgaggtggaggcgttc
gacccccgctttgctggcaaccgcttcggcgtggccatgcacgatgtgttcgaacgctgc
gacttcgccgcctggcgcaactggtgccccggccagcccgcgcccgagggccaggccgcc
gccattctcgaagcgctgcaacgcggcggctacgcccaggacgaactggacgacggcctg
gccatgctcacccgcctggtcggccacaccctcaccgtgaccctgcccgagggcacctgc
ctggccgcggtgcccgagccgcagcgccgcaacgagatggaattccacttcgccatgcgg
cccacccgcgtggacgccctgctggcgctgctgcaccgcttcggcgtggtcaccgagcgc
caggccttcggcgcgcgccaacgcctggaaggcctgatgaccggcctgatcgacctcacc
tactgcgcggacgggcgctggtacgtgctcgactacaaatccaaccgcctgccggcctac
gaccccgacgccctggcgcgggccatggcgcacagcgagtacgaactgcaggcgctgatc
tacaccatcgccttgcaccgttggctgcgcttccgcctgggtgccagctacgactacgcc
cgcgacttcggcggcgtgcgctacctgttctgccgcggcctggacgcggcccgtaacccc
gccgccgactccagctccatcctcggttccggttccggttccgactccgactccgactcc
gactccgactccgactccgactccgactccgtcaacggcgccagctccgtctccggttcc
gaccccgccagcgacgccatgtccgatacgcctgcacccaatacgcctgtgcctggcatt
tacgcctggcgcttcgatccggcgctggtccaagccctggacgccctgttcgccggcaat
cccaccgagcctctttccagtgacgccttaaagcccctctcccctcgggagaggggttgg
ggtgagggtacgtccaccacgggaacgcccaccccatga
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