Xanthomonas campestris pv. campestris 8004: XC_0254
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Entry
XC_0254 CDS
T00247
Name
(GenBank) biotin carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00280
Valine, leucine and isoleucine degradation
xcb01100
Metabolic pathways
Module
xcb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XC_0254
Enzymes [BR:
xcb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
XC_0254
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
BT_MCC_alpha
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AAY47341
UniProt:
A0A0H2X364
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All DBs
Position
complement(307996..310023)
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AA seq
675 aa
AA seq
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MPQHASITGKGQPYFDKVLIANRGEIACRVIATCRRLGIATVAVYSDADRDARHVRLADE
AIHIGASPAQQSYLRGDAILAAARASDAQAIHPGYGFLSENAGFADACAQAGVVFIGPPA
QAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQADAIGYPVLIKASAGGGGKG
MRRVDASAAFEDALASCQREAQSAFGNAHVLVEKYVERPRHIEIQVFADTHGAVVHLFER
DCSVQRRHQKVLDEAPAPGMTEQRRAAMGKAAVDAARAVGYVGAGTVEFIAGPDGDFYFM
EMNTRLQVEHPVTELITGTDLVDWQLRVAAGLPLPKRQDELRIHGHALEARLYAEDADRG
FLPSTGTLRQLRLPAASAHVRIDAGVEQGDTISPYYDPMIAKLIVWDHDRPAALARMRDA
LAHCHAIGVTTNSAFLARLVSTQAFATADLDTGLIEREQAALFPAPQPPPMAWWCLAAVL
VAEAAPHAAADPADPFSPWQLADGWRIGAHAARTLVLEAAGERRTLAVRPTADGWQVDSA
DQTHTLRYHAHGEHLRVDMDGRQWRAQILRDGTAITVLSGAQRAHFQHHDALVEAEQPAQ
AEGGLTAPMPGRVVALVAPLGEPVRRGQALVVLEAMKMEHTLHAPADGTVQAYLVAEGDL
VADGVALVEFVSASA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacgcctccatcactggcaaaggccagccgtatttcgacaaggtgctgatc
gccaaccgcggcgaaatcgcctgccgcgtcatcgccacctgccgccggctgggcatcgcc
accgtggcggtgtattcggatgccgaccgcgacgcgcgccacgtgcgtctggcagatgaa
gcgatccatattggtgcgtcaccggcgcagcaaagctacctgcgcggcgacgccatcctt
gccgcggcacgcgccagcgatgcacaggcgatccatcccggctacgggtttttatcggaa
aacgccgggtttgccgacgcctgcgcgcaggcaggggtggtattcatcggcccgcccgcg
caagcgatccgcgcgatgggcgacaagagtgctgccaaggcgctgatgcagcgcgccggc
gtgccgctgacgccgggctaccacggcgacgagcaggcacctgcgtttctgcgcgcacag
gccgatgcgatcggctacccggtgctgatcaaggccagcgccggcggcggcggcaagggc
atgcgccgcgtggatgccagcgcagcattcgaagacgcgttggccagctgtcagcgcgaa
gcgcaatcggcgttcggcaatgcgcatgtgctggtggaaaaatacgtcgagcgcccacgg
cacatcgagatccaggtgttcgccgatacccatggcgcggtggtgcatctgttcgaacgc
gactgctcggtgcaacgccgccatcagaaagtgctggacgaagcccccgcacccggcatg
accgaacagcgccgcgcggcgatgggcaaggcggcagtggatgccgcacgggcggtgggc
tacgtgggcgccggcacggtggaattcatcgccgggccggacggcgatttttatttcatg
gaaatgaacacccggctgcaggtggagcaccctgtcaccgagctgatcaccggcaccgat
ttggtggactggcagctgcgcgtggccgccggcctgccgctgcccaagcgccaggacgaa
ttgcgcatccatggccatgccctggaagcgcgcctgtacgcagaagatgccgaccgcggc
ttcctgccttccaccggcaccttgcggcaactgcgcctgccggccgcgagcgcgcacgtg
cgcatcgatgccggtgtggaacagggcgacaccatcagcccgtattacgacccgatgatc
gccaagctgatcgtctgggatcacgaccgccccgccgcgctggcgcgcatgcgcgacgca
ttggcacactgccatgcgatcggggtgaccaccaacagcgcgttcctggcgcggctggtc
agcacgcaggcgtttgcgactgccgacctggacactggcctgatcgaacgcgagcaggcg
gcgctgtttcccgcgccgcagccgccgcccatggcatggtggtgcctggccgcggtgctg
gtggccgaagccgcaccgcacgccgccgccgacccggccgacccgttctcgccatggcaa
ctcgccgatggctggcgcatcggcgcacatgccgcgcgtacgctggtgctggaggccgca
ggcgagcgccgcacactggcggtgcggcccaccgccgatggctggcaggtggacagtgcc
gatcaaacccacacgctgcgctatcacgcacacggcgagcacctgcgtgtggacatggat
ggccgccaatggcgcgcgcagatactgcgcgatggcactgccatcaccgtgctcagtggc
gcgcagcgcgcgcatttccaacatcacgatgccctggtcgaagccgagcaaccggcgcag
gccgaaggtggcctcaccgcacccatgccaggccgcgtggtcgcgctggttgcgccgctc
ggcgaaccggtccgccgtggccaggccctggtggtgctggaagccatgaagatggagcac
accctgcatgcgcctgccgacggcaccgtgcaggcctatctggtggccgaaggcgacctg
gtcgcagacggtgtcgcgttagtggaattcgtgtccgcgtctgcgtag
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