Xanthomonas campestris pv. campestris 8004: XC_0379
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Entry
XC_0379 CDS
T00247
Name
(GenBank) protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00362
Benzoate degradation
xcb01100
Metabolic pathways
xcb01120
Microbial metabolism in diverse environments
xcb01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XC_0379
00624 Polycyclic aromatic hydrocarbon degradation
XC_0379
Enzymes [BR:
xcb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
XC_0379
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AAY47464
UniProt:
A0A0H2X3G9
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Position
441134..441871
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AA seq
245 aa
AA seq
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MPMHDLPPDTPPGDVLLGYRRPRAGTQPAYLHAPYASTALRAPTRAPIAMPVTLSEVTGP
RPSQITLGAHAADLTAGFAGEPLGERIIVSGRVLDENGAPVRNSVVEVWQCNAAGRYQHE
GDRHDAPLDPNFRGTGQVLTDAHGRYAFKTIKPGAYPWRNHYNAWRPAHIHFSLHGDGIG
QRLITQMYFPGDPLLAHDPIYNCVDDPLARDRMVSSFDWEHAVSEYALAYRFDIVLRGRK
QTVWE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgcacgaccttccccctgatacgccgcccggcgatgtcctgctcggctatcgg
cgcccccgcgccggcacgcagcctgcctacctgcatgcgccgtatgcgtccaccgcgttg
cgtgcgcccacgcgtgcaccgatcgccatgccggtcacgctgtcggaagtcaccgggcca
cggccttcgcagatcaccctcggcgcgcatgcggccgacctcaccgccggctttgccggt
gagccactgggcgagcgcatcatcgtgtccggccgtgtgctcgacgaaaacggcgcgccg
gtccgcaatagtgtggtggaggtctggcaatgcaatgcggccgggcgctaccaacacgag
ggcgaccgccacgatgcgccgctggatcccaactttcgcggcaccggccaggtgctgacc
gacgcgcacgggcgctacgccttcaagaccatcaagcccggcgcctatccctggcgcaat
cactacaacgcctggcggccggcgcatatccatttttcgctacacggcgatggcatcggc
caacgcctgatcacgcagatgtatttccccggtgatccgttgctcgcgcacgacccgatc
tacaactgcgtggacgacccgctggcacgcgaccgcatggtgtccagtttcgattgggag
cacgcggtgagcgaatacgcgctggcctatcggttcgacatcgtgctgcgcggccgcaag
caaaccgtctgggagtga
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