Xanthomonas campestris pv. campestris 8004: XC_0519
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Entry
XC_0519 CDS
T00247
Name
(GenBank) ice nucleation protein
Organism
xcb
Xanthomonas campestris pv. campestris 8004
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ice_nucleation
DUF3432
Motif
Other DBs
NCBI-ProteinID:
AAY47600
UniProt:
A0A0H2X3S3
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All DBs
Position
612536..616537
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AA seq
1333 aa
AA seq
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MNREKVLALRTCTNNMSDHCGLIWPLSGIVECRHWQPSIKQENGLTGLLWGQGTNAHLNM
HADAHWVVCMVDTADIIWLGEEGMIKFPRAEVVYAGNRAGAMSCIAAGIEQHSPPKPEPP
ADSVIAAEFTPKAAHAQFTAPIVESGAHSTAPLPSPPNGIGPQAAQPSNAILRTREIATY
GSTLTGADQSQLIAGYGSTETAGNGSELIAGYGSTGVAGSDSTIVAGYGSSQTAGGGSTL
TAGYGSTQTARNGSELTAGYGSTETAGADSSLIAGYGSTQTSGGDSSLTAGYGSTQTAQN
GSDLTAGYGSTSTAGTDSSLIAGYGSTQTSGGESSLTAGYGSTQTAQDGSDLTAGYGSTG
TAGADSSLIAGYGSTQTSGNDSSLTAGYGSTQTARTGSDLTAGYGSTSTAGADSTLIAGY
GSTQTSGGDSSLTAGYGSTQTARKGSDLTTGYGSTSTAGADSTLIAGYGSTQTSGSESSL
TAGYGSTQTARKGSDLTAGYGSTSTAGADSTLIAGYGSTQTSGGESSLTAGYGSTQTARK
GSDLTAGYGSTSTAGGDSTLVAGYGSTQTSGGDSSLTAGYGSTQTARSGSDLTTGYGSTS
TAGGESTLIAGYGSTQTSGNASSLTAGYGSTQTARSGSDLTTGYGSTSTAGADSTLIAGY
GSTQTSGGESSLTAGYGSTQTARKGSDLTTGYGSTSTAGADSTLIAGYGSTQTAGGESSL
TAGYGSTQTARKGSDLTAGYGSTSTAGSDSSLIAGYGSTQTAGFKSILTTGYGSTQTAQE
GSLLTAGYGSSSTAGSDSSLIAGYGSTQTAGFKSILTAGYGSTQTAQERSTLTTGYGSTS
TAGHDSTLIAGYGSTQTAGYKSILTTGYGSTQTAQESSSLIAGYGSSSMAGPDSSLIAGY
GSTQTAGYDSFLTAGYGSTQTAQSSSWLITGYGSTSTASFQSSLIAGYGSTQTAGYESTL
TAGYGSTQTAQEISWLTTGYGSTQTAGHGSILTAGYGSNSTAGYESTLIAGYGSTQTAGY
ESTLTAGYGSTLTALENSSLTAGYGSTEIAGFSSTLIAGYGSSQTAGGDSTLTAGYGSTL
MALDNSTLTAGYGSTETAGQDSSLIAGYGSNLTSGVRSYLTAGYGSNQIASYGSSLIAGH
ESTQIAGHRSMLIAGKLSSQTAGSRSTLIAGRGSIQTAGDRSKLIAGADSTQIAGDRSKL
LAGSNSFLTAGDRSKLTAGDDCTLMAGDRSKLTAGKNSILTAGANSRLIGSLGSTLTGGE
DSVLIFRCWDGKRYTNIIAKTGEEGVEADIAYQVDDDKNVVEKFDDPFDTIVLRHDGGPA
SAADHALVEQAPN
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaaaaagtcttggcattacgcacttgcacgaacaacatgtccgatcattgc
gggctgatctggccactgtccggcatcgtcgaatgtcggcattggcaacccagcatcaaa
caggaaaacggcttgaccggcttgttgtggggacagggcaccaatgcgcatctgaacatg
catgccgacgcgcattgggtcgtctgcatggtggacaccgccgacatcatctggctgggc
gaagagggaatgatcaagttccccagggcggaggtggtctacgccggcaaccgtgcaggc
gcgatgagctgcatcgccgccggcatcgagcaacattcgccacccaagcccgagccgcct
gcagacagtgtgattgctgcggagttcactcccaaggcggcgcatgcgcaattcacggcg
cccatcgttgaaagcggtgcgcattccaccgcgccactgccatcgccgcctaatggcatc
ggcccacaagccgcgcagccgtcaaatgcgatcctgcgtacccgcgaaatcgccacctat
ggcagcacgctcactggcgccgatcagagtcagctgatcgcaggctatggaagtaccgag
accgcggggaacggcagcgagttgatcgccggctacggcagcaccggcgtggccggatcc
gacagcaccatcgttgccggctatggcagctctcaaacggccggaggcggaagcacgctg
actgccgggtatggcagcacacagaccgcccgcaatggcagcgagctgacggccggttac
ggcagtacggaaaccgccggtgcagacagctcgctgatcgcaggctacggcagcacgcaa
acctccggcggcgacagctcgttgactgccggctatggcagtacccaaaccgcgcagaac
ggcagcgacctcaccgccggctacggcagcaccagcacggcgggcaccgatagctcgctg
atcgccggctacggcagcacccagacctcgggcggagagagctcgctcactgccggctat
ggcagcacgcagacggcgcaggacggcagcgacctcaccgccggctatggcagcacaggc
accgcaggtgcagatagctccctgattgctggttatggcagtacgcagacatccggcaac
gacagctcgctgacggcgggctacggcagcacccaaaccgcccgtaccggcagcgacctc
actgcgggttacggcagcacctccaccgctggtgcggacagcacgctgatcgccggttat
ggcagcacccagacttccggcggggacagttcgctcaccgccggctacggcagcacccaa
accgcgcgcaagggtagcgacctcacgacggggtacggcagcacctcgaccgccggcgcg
gacagcaccttgatcgccggctacggcagcacgcagacctcgggtagcgagagttcgctc
acggctggctatggcagtacgcagaccgcacgcaagggcagtgacctcaccgccggctac
ggcagcacctcgaccgccggtgcggacagcaccttgatcgccggctacggcagcacgcag
acctccggtggcgagagttcgctcaccgctggctatggcagtacgcagaccgcacgcaag
ggcagcgacctaaccgccggttacggcagtacctcgacggctggcggtgacagcacgctg
gtcgcgggctacggcagcacccagacctccggcggcgacagttcgctgaccgccggctac
ggaagcacgcagaccgcacgtagcggcagcgatctgaccaccggctatggcagcacctcg
acggctggtggcgagagcacgctgattgccggttatggcagcacgcagacatcgggcaat
gccagttcgctcactgccggctacggcagcacgcagacagcacgcagcggcagcgatctg
accaccggctatggcagcacctccactgctggcgccgacagcaccttgattgccggttac
ggaagtacccagacctccggcggggaaagttcgctcactgcaggctatggcagcacgcag
accgcgcgcaaaggcagcgacctgaccaccggctacggcagcacctccaccgccggtgcc
gacagcaccttgattgccggttacggcagcacccagaccgctggtggcgagagctcgctg
acggcgggctatggcagcacgcagaccgcgcgtaagggcagtgacctcaccgccggttac
ggcagcacctccaccgcaggttcggacagttcgctgatcgccggctatggcagcacgcag
acggccggcttcaaaagcatcctgaccaccggctacggcagcacccagaccgcgcaagag
ggcagcctgctcacggccggctatggcagttcctcaacggccggttcggacagttcgctg
atcgccggctatggcagcacgcagacggccggcttcaaaagcatcctcaccgcaggctat
ggcagcacccagaccgcgcaagagcgcagcaccctcaccaccggttacggcagtacatcg
acggcagggcatgacagtacgctgatcgccggttatggcagcacgcagacggccggctac
aagagcattctcaccaccggctatggcagcacccagaccgcgcaggaaagcagttcgctg
atcgccggctacggcagttcctccatggccggcccggacagctcgctgatcgccggttat
ggcagtacccagactgccggttacgacagcttcctgacggccggttacggcagtacccag
accgcgcagagcagcagctggctaatcaccggctacggcagtacgtccaccgccagcttc
cagagttcgttgattgccggctatggcagcacgcagacggccggctacgaaagtaccttg
accgccggctacggcagcacccagacggcgcaggaaatcagttggcttaccaccggctat
ggcagcacgcaaacggccggccatggaagcatcctgaccgccggttacggcagcaattcc
accgcaggttacgaaagtaccctgatcgcgggctacggcagcacccagaccgcaggttac
gaaagcaccctgaccgccggttacggcagcacgctgactgcgctggaaaacagttcgctt
accgccggctacggcagtaccgaaatcgccgggttctccagcacgctaatcgccggctat
ggcagcagccagaccgccggtggcgacagcaccctgacggcaggctacggcagcacgctg
atggctctggacaacagcactctgacggcaggctacggcagcaccgagaccgcagggcag
gacagctcgctgatcgcaggttatggcagcaacttgaccagtggcgtgcgcagctatctg
acggccggctatggcagcaaccagattgcaagctacggaagctcgttgatcgccgggcac
gaaagcacccagatcgccggccatcgcagcatgctgattgcgggcaagctgagttcgcag
acggccggttcgcgcagcacgctgatcgccggcaggggcagcatccagactgcaggcgat
cgcagcaagttgatcgccggcgccgacagcacccagatcgccggcgatcgcagcaagttg
ttggccggcagtaacagcttcctcaccgcaggggaccgcagcaaactcaccgcaggtgac
gattgcacgctgatggcaggcgaccgcagcaagttgaccgccggaaagaacagcatcctg
accgcgggcgccaacagccggttgatcggtagcctgggctccaccctcaccggtggcgaa
gactcggtactgatcttccgatgctgggacggcaagcgctacaccaacatcattgccaag
accggagaggagggcgtggaggccgacatcgcctatcaggtcgacgacgacaagaacgtg
gtcgaaaaattcgacgatccgttcgacaccatcgtgcttcggcatgatggcgggcccgct
tctgcggccgatcacgcgctggtggagcaggcgcccaattga
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