Xanthomonas campestris pv. campestris 8004: XC_0535
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Entry
XC_0535 CDS
T00247
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XC_0535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcb03019
]
XC_0535
03110 Chaperones and folding catalysts [BR:
xcb03110
]
XC_0535
03029 Mitochondrial biogenesis [BR:
xcb03029
]
XC_0535
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcb04147
]
XC_0535
Enzymes [BR:
xcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XC_0535
Messenger RNA biogenesis [BR:
xcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XC_0535
Chaperones and folding catalysts [BR:
xcb03110
]
Heat shock proteins
HSP60 / Chaperonin
XC_0535
Mitochondrial biogenesis [BR:
xcb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XC_0535
Exosome [BR:
xcb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XC_0535
Exosomal proteins of other body fluids (saliva and urine)
XC_0535
Exosomal proteins of breast cancer cells
XC_0535
Exosomal proteins of colorectal cancer cells
XC_0535
Exosomal proteins of bladder cancer cells
XC_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AAY47616
UniProt:
Q4UZA7
LinkDB
All DBs
Position
632632..634272
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DQAVKAAVIELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLALEKATIKDLGRAKKVQVSKENTTIIDGAGDSATIEARVGQIKTQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALVAVGNLTGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGTGNYGYNA
ANGEFGDMVEFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPAMPAGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacattcgtttcggtgaagatgcgcgtacccgtatggtgcgtggcgtc
aacgttctcgccaatgccgtgaaggcaaccctgggcccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgcgccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggctgacaagttcgagaacatgggcgcgcagatggtcaaggaagttgcttccaag
accaatgacaacgctggcgacggcaccaccaccgccaccgtgctggcccaggccctgatc
cgcgaaggcgccaaggctgtggccgccggcatgaacccgatggatctgaagcgcggtatc
gaccaggccgtcaaggccgccgtcatcgagctgaagaacatctccaagcccaccaccgac
gacaaggcgattgcccaggtcggcaccatctcggccaactcggacgaatcgatcggcaac
atcattgccgaagcgatgcagaaggtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgagctggacgtggtcgagggcatgcagttcgatcgcggctacctc
tccccgtacttcatcaacaaccagcagagccagtcggccgatctggacgacccgttcatc
ctgctgcacgacaagaagatctccaacgtgcgtgacctgctgcccgtgctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtcgctgaagaagtcgaaggcgaagccctggcg
acgctggtggtcaacaccatccgcggcatcgtcaaggtcgtggccgtcaaggcaccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtgggtctggccctggaaaaggccacgatcaaggatctcggccgcgcg
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgccggcgattcggcc
acgatcgaagcccgcgtgggccagatcaagacccagatcgaagacacctcgtccgattac
gaccgtgagaagctgcaggaacgcgtggccaagctggccggtggcgttgcagtgatcaag
gtcggcgcgtcgaccgaaatcgaaatgaaggaaaagaaggcccgcgtcgaagacgccctg
cacgccacccgtgcagccgtcgaagaaggcgtggtcccgggcggcggtgtggccctggtg
cgtgcgctggtggccgtcggcaacctgaccggtgccaacgaagaccagacccacggcatc
cagattgccctgcgcgccatggaagccccgctgcgcgaaatcgtggccaacgccggcgaa
gagccgtccgtgatcctgaacaaggtcaaggaaggcaccggcaactacggctacaacgca
gccaacggcgagttcggcgacatggtcgaattcggcatcctggacccgaccaaggtcacc
cgttcggcgctgcagaacgcagcatcgatcgccggcctgatgatcaccaccgaagccatg
gtggccgatgcaccgaagaaggacgagccggcgatgccggccggcggtggcatgggcggc
atgggcggcatggatttctga
DBGET
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