Xanthomonas campestris pv. campestris 8004: XC_1133
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Entry
XC_1133 CDS
T00247
Name
(GenBank) holliday junction binding protein, DNA helicase
KO
K03550
holliday junction DNA helicase RuvA
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XC_1133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcb03400
]
XC_1133
DNA repair and recombination proteins [BR:
xcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XC_1133
RecFOR pathway proteins
XC_1133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
IMS_HHH
Transposase_20
HHH_3
HHH_8
Cdd1
Motif
Other DBs
NCBI-ProteinID:
AAY48203
UniProt:
Q4UXM0
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All DBs
Position
1375274..1375858
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AA seq
194 aa
AA seq
DB search
MIGRLRGILAYKQPPWLVIDVGGVGYELEAPMSTFYDLPDVGRDVILFTHYAQKEDSVSL
YGFLREGERRLFRDVQKVTGIGAKIALAVLSGVTVDEFARLITSGDITALTRIPGIGKKT
AERMVVELRDRAADFSSGAPITGQLGPDAVSEATVALQQLGYKPAEAARMAREAGAEGDE
VATVIRKALQAALR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccgtctgcgcgggatcctggcctacaagcagccgccgtggctggtgatcgac
gtgggcggggtgggctatgagctggaggcgccgatgagcaccttctacgacctgcccgat
gtcggccgcgacgtcatcctgttcacccattacgcgcagaaggaagacagcgtgtcgctg
tacggcttcctgcgcgagggcgagcgccggctgttccgcgacgtgcagaaggtcaccggc
atcggtgccaagattgcgctggcggtgctgtccggggtcaccgtggacgaattcgcgcgg
ctgatcaccagtggcgacatcactgcgctgacccgcatccccggcatcggcaaaaagacc
gccgagcgcatggtggtggagctgcgcgaccgcgcggccgacttcagcagcggcgcgccg
atcaccggccagctgggcccggatgcggtgtccgaggccaccgtggcgttgcagcagctg
ggctacaagcccgccgaggccgcgcgcatggcacgcgaggccggggccgaaggcgacgag
gtcgccaccgttattcgcaaggccctccaggccgcgctgcgctag
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