Xanthomonas campestris pv. campestris 8004: XC_1298
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Entry
XC_1298 CDS
T00247
Name
(GenBank) pectate lyase II
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00040
Pentose and glucuronate interconversions
xcb01100
Metabolic pathways
xcb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XC_1298
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XC_1298
Enzymes [BR:
xcb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XC_1298
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AAY48367
UniProt:
A0A0H2X5P0
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All DBs
Position
1586666..1587727
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AA seq
353 aa
AA seq
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MTSKTLQGALALALSACAAGAIAGPVGYGAATTGGGNKVPVNVATFEAMQSAIDSYSGSG
GLVLNYTGKFDFGTIKDVCAQWKLPAKTVQIKNKSDVTIKGANGSAANFGIRVVGNAHNV
IIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDM
KKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRRGLSH
IYNNYFNNVTTSGINVRMGGIAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITW
GTPDGSKPYANATNWISTKVFPESLGYIYTVTPAAQVKAKVIATAGAGKNLAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactagcaaaacgcttcagggcgcactcgcgcttgcactgtccgcttgcgctgcgggc
gcgatcgcaggtccggtcggctacggtgccgccaccaccggcggcggcaataaggttccg
gtgaatgtggccacgttcgaggcgatgcagtcggccatcgacagctactccggcagcggc
ggcctggtgctgaactacaccggcaagttcgacttcggcaccatcaaggatgtctgcgcg
cagtggaagctgcccgccaagaccgtgcagatcaagaacaagagcgatgtcaccatcaag
ggtgccaacggctcggctgccaacttcggtattcgcgtggtgggcaatgcgcacaacgtg
atcatccagaacatgaccatcggtctgttgcagggcggcgaagatgccgattcgatttcg
ctggaaggcaactccagtggcgagccgtccaagatctgggtcgaccacaacacggtattc
gcctcgctcaccaagtgctccggcgccggtgatgcctccttcgatggcggcatcgacatg
aagaagggcgtgcatcacgtcaccgtgtcctacaactacgtctacaactaccagaaggtg
gcgttgaacggttacagcgacagtgacaccaagaactcggccgcgcgtaccacctaccac
cacaaccgcttcgagaatgtggaatcgcgcgtgccgctgcagcgccgtggcttgagccac
atctacaacaactacttcaacaacgtcaccacctccggcatcaatgtacgcatgggcggc
attgccaagatcgagtccaattacttcgagaacatcaagaacccggtgacctcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgtcggcagcggcatcacctgg
ggcacgcccgatggcagcaagccctacgccaatgccaccaactggatcagcaccaaggtg
ttccccgaatcgctgggctacatctacacggtcacgccggctgcgcaggtcaaggccaag
gtgatcgccaccgcaggggcgggcaagaacctggccgagtga
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