Xanthomonas campestris pv. campestris 8004: XC_1372
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Entry
XC_1372 CDS
T00247
Name
(GenBank) diaminopimelate decarboxylase
KO
K12526
bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:
4.1.1.20
2.7.2.4
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00260
Glycine, serine and threonine metabolism
xcb00261
Monobactam biosynthesis
xcb00270
Cysteine and methionine metabolism
xcb00300
Lysine biosynthesis
xcb00470
D-Amino acid metabolism
xcb01100
Metabolic pathways
xcb01110
Biosynthesis of secondary metabolites
xcb01120
Microbial metabolism in diverse environments
xcb01230
Biosynthesis of amino acids
Module
xcb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
xcb_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XC_1372
00270 Cysteine and methionine metabolism
XC_1372
00300 Lysine biosynthesis
XC_1372
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XC_1372
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
XC_1372
Enzymes [BR:
xcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.4 aspartate kinase
XC_1372
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XC_1372
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
AA_kinase
Orn_DAP_Arg_deC
ACT_9
Ala_racemase_N
ACT
Motif
Other DBs
NCBI-ProteinID:
AAY48441
UniProt:
A0A0H2X7B1
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All DBs
Position
1656510..1659119
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AA seq
869 aa
AA seq
DB search
MSASLSTDRWIVLKFGGTSVSRRHRWDTIGKLASKRANETGGRVLVVVSALSGVTNELTA
IADGAADSAQRVAALELRHREFLAELELDADAVLGARLAALHALVGDARAASRTLDWQAE
VLGQGELLSSTIGAAYLHANGLDMGWLDAREWLSALPPQPNQSEWSKRLSVSCQWQSDAA
WRARFDAQPTRLLITQGFISRHADGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGM
FSANPKEVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDSGVPMAILDTERPDLPG
TSIDGSAEPVLGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFTLFKKHGLSVDLIGSAE
TNVTVSLDPSENLVNTDVLAALSADLSQICKVKIIVPCAAITLVGRGMRSLLHKLSDVWA
TFGQERVHMISQSSNDLNLTFVIDESDADGLLPILHAELIDSGAMPVSEGEVFGPRWRDI
IGSVRPRPTPWWHAERAHLLTLSKAGTPRYVYHLPTVRARAQALAQIAAVDQRYYAIKAN
SHPAILMALEQAGFGLECVSHGELRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVT
VTVDNVEALKRWPELFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELA
RTLEVTITGVHAHLGSGVETGEHWRMMYDELAGFARRIGTVETIDIGGGLPIPYSAEDEP
FDLELWAKGLAEVKAVHPGFRLAIEPGRYLVAEAGVLLAQATQVIEKDGVHRVGLDAGMN
SLIRPALYDAWHDIENLSQLGAPADGSFDVVGPICESSDVFGKRRRLPAATAPGNVMLIA
DAGAYGYSMASTYNQRELPREEVIDAAAG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttccctttctaccgatcgttggatcgtcctcaagttcggcggcacctcggtg
tcgcgtcgtcatcgctgggacacgattggaaaactggcgagcaaacgggcgaacgaaacc
ggcggccgcgtgctggtggtggtgtctgcgttgtcgggcgtcaccaacgagctcactgcc
atcgccgatggtgctgccgacagcgcgcagcgcgtggcggcactggaactgcggcatcgc
gaattccttgccgagcttgagctcgatgccgacgcagtgctgggcgcgcggcttgccgcg
ttgcacgcgttggtgggcgatgcacgcgctgccagccgcacgctcgactggcaggccgag
gtgctggggcaaggcgaattgctgtcttccaccatcggtgcggcctatctgcatgccaat
ggcctggacatgggctggctggatgcgcgggagtggttgtcggcgttgccgccgcagccc
aaccagagcgagtggtccaagcgcttgtcggtgtcgtgccagtggcaatccgatgccgca
tggcgggcgcgtttcgatgcgcagcccacgcggctgctgatcacgcagggctttatctcg
cggcacgccgatggcggcaccgcgatcctgggccgtggcggctcggacacctcggcggcg
tatttcggtgcattgctcggcgccagccgggtggaaatctggaccgacgtgcccggcatg
ttcagcgccaacccgaaggaagtgccggatgcgcgtctgctgacccgcctggactattac
gaagcgcaggaaatcgccaccaccggcgccaaggtgctgcatccgcgctcgatcaagccc
tgccgcgattccggcgtgccgatggcgatcctggataccgaacgcccggatctgccaggc
accagcatcgatggcagcgccgaaccagtactcggcgtcaaggcgatcagccgccgcaac
ggcatcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctggcc
gatgtgttcacgctgttcaagaagcatggcttgtcggtggatctgatcggctcggccgaa
accaacgtcaccgtctcgctggacccgtccgaaaacctggtcaacaccgatgtgctggcg
gcgttgtcggcagacctgtcgcagatctgcaaggtcaagatcatcgtgccgtgcgcggcg
atcacgctggtcgggcgcggcatgcgctcgctgctgcacaagctgtccgacgtgtgggcc
acgttcggtcaggagcgcgtgcacatgatttcgcagtcgtccaacgacttgaacctgacc
ttcgtcatcgacgaatccgatgccgacggcctgttgccgattttgcatgcggaattgatc
gatagcggcgccatgccggtcagcgaaggtgaggtgtttggcccacgctggcgtgacatc
atcggttcggtgcggccgcggcccacgccgtggtggcatgccgagcgcgcgcatctgctg
acgctgtccaaggccggcacgccgcgttacgtgtaccacctgcccacggtgcgcgcgcgc
gcgcaagcgctggcgcagattgccgcagtggatcagcgctattacgcgatcaaggccaac
tcgcatccggccatcctgatggcgctggaacaggctggattcggcctggaatgcgtctcg
cacggcgaattgcgccgcgtgttcgacacgttgcctgagctgtcgccacgccgcgtgttg
ttcacgccgagcttcgcgccgcgtagcgaatacgaggccgcgtttgcgctgggcgtaacc
gtcaccgtggacaacgtcgaagcgctcaagcgctggccggagttgttccgcggccgcaac
gtgtggctgcgcatcgacctgggccacggcgatggccaccacgagaaggtcaacaccggt
ggcaaggcgtccaagttcgggctgtcgtccacgcgcgtggatgagttcgtcgagttggca
cgcacgctggaagtcaccatcaccggcgtgcatgcgcatctgggcagcggcgtggagacc
ggcgaacactggcggatgatgtacgacgaactggccggcttcgcgcgccgcatcggcacc
gtggagaccatcgacatcggcggtgggctgccgattccctacagcgccgaagacgagccg
ttcgacctggagctgtgggccaagggcctggccgaggtcaaggccgtgcatccgggcttc
cgcctggcgatcgagcctggccgttatctggtggccgaggccggcgtgttgctggcccag
gcgacccaggtgatcgaaaaggacggcgtccatcgcgttggcctggatgccggcatgaat
agcctgatccgcccggcgctgtacgacgcctggcacgacatcgaaaacctcagccagctc
ggtgcgcctgccgatggcagcttcgatgtggtggggccgatctgcgaatcctccgatgtg
ttcggcaagcgccgccgcctgcccgcggcgaccgcaccgggcaatgtgatgctgatcgct
gatgccggcgcgtatgggtattccatggccagcacctacaaccagcgggagttgccgcgc
gaagaggtgatcgatgcggccgctggctga
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