KEGG   Xanthomonas campestris pv. campestris 8004: XC_1799
Entry
XC_1799           CDS       T00247                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcb03400]
    XC_1799
Enzymes [BR:xcb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XC_1799
    5.6.2.6  RNA 3'-5' helicase
     XC_1799
DNA repair and recombination proteins [BR:xcb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    XC_1799
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 PhoH AAA_25 DUF5805 HTH_9 DUF3258
Other DBs
NCBI-ProteinID: AAY48862
UniProt: A0A0H2X6P5
LinkDB
Position
2184282..2188676
AA seq 1464 aa
MHPVLQHFHPVVAAWFGRTFAAPTPAQIAAWPAIKAGRHTLVAAPTGSGKTLTAFLAAID
ALIRDGLAQGGALPDQTRVIYVSPLKALSNDIHLNLEAPLHGIRAELLAQGLPDVPVRTA
VRTGDTPQRERAQARRVPPHILVTTPESLYVLLGSASGRSALRHVRTVIVDEIHAVAADK
RGSHLALTLERLQRLAEQPITRVGLSATQKPIDTVAQFLVGVGEDGAAAPCEIVDIGYTR
QRDLALALPPTPLSVVLSNDQWLQVYAEVAALAQQHRTTLVFVNTRRMAERAARHLGELL
GKQRVAAHHGSLSRETRLLAERRLKAGELTVLVATASLELGLDIGDVDLVCQLGSPRSIA
TFLQRAGRSGHAVGGTPKARLFPQTRDELVECAALLDGIRRGELDALRFPIAPIDVLAQQ
IVAEAACEDWDEDALFALVRRAWPFATLSRATFDAVVRMLCEGFSTRLGPRAGYLHRDAV
NRRLHARRGARMTALTSGGTIPETGDYSVVLEPQAENIGTVNEDFAVESLTGDVFQLGNA
SYRILRVDADKVRVEDAKGAPPNIPFWLGEAPGRSDALSLAVSRLREEIATRLDGARHAG
AQAWLCDEVGLAAEPAQQLVEYLANACQALGAMPTQHCLVMERFFDATGGTQLIIHSPYG
SRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTSHSFALEEVARYLHSASAEHVL
VQALLDAPLFGVRWRWNATNAMALPRFSGGNKVAPQLQRMKSEDLLATVFPDQVACAENL
VGEREVPDHPLVAQTLEDCLHQSMDSEGWLQVLRGLESGAITLVARDLAAPSPLAAEALN
ARPYAFLDDAPLEERRTQAVQGRRYTPQSSDDLGQLDPQAIAAVREEAWPQPRDAEEMHE
ALVGLGVLPVEEALDAQWQAWLSALSAAGRATCLAVDGGTALWISAERIEWFAPLYPHAV
AQPPLQAPPDCRVDDWQREWAVRELVRGRLSAVGPAQVSALCSAVRLPAAEVELALIGLQ
REGYVMAGRFSAQALEEEWCERHLLARIHRYTLGRLRREIEPVSQRDYARFLFEWQHLDA
DHRVAGPDALAGIVGQLEGFEAPAALWESELLPARVRDYQPAWLDELCTAGRTVWARLRP
GGGRSGNALRGTPIVLLPRREAQRWNALARADDDAPLGSRAQRVVEVLQEQGALFFDEIA
DAARLMATELEDVLSELVMRGRVHCDSYAGLRALLVPASKRPSALSRQRRRASALGIRDA
GRWAPVRNLPSLPLAEASERHQEMLEHVARALLRRYGVVCWRLLEREAAWLPPWRELLRV
YQRLEARGELRGGRFIAGVSGEQFALPDAIAAMRRVRAQPLAQQWICLSASDPANLLGNL
LPGERIARVPGNRVAFLDGLPMAAWSGDRFQPLQELSHEHGEQALRLLQRGPGAAEQTPL
QQWLAQSPVTDARAPLTRGSGRDR
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgcatccagtcctgcagcattttcatcccgtggtcgccgcctggtttgggcgtaccttt
gctgcgcccaccccggcgcagatcgccgcgtggccggcgatcaaggccgggcggcatacc
ctggtggcggcgccgaccggctccggcaagacccttaccgcgttcttggcagcgatcgac
gcgttgatccgtgacggcctggcccagggcggtgcgctgccggaccaaacgcgggtgatc
tacgtctcgccgctcaaggccttgtccaacgacatccatctgaatctggaggcgccactg
cacggcatccgtgcggagttgctcgcgcagggcctgcccgatgtgccggtgcgtacggcg
gtgcgcaccggcgacacgccgcagcgcgagcgggcccaggcgcggcgcgtgccgccgcat
attctggtgaccacgccggagtcgctgtacgtgttgctgggctcggcctccgggcgcagc
gcgttgcgccatgtacgcacggtcatcgtggacgagatccacgcagtggcagcggacaag
cgcggcagccatctcgcattgaccctggagcgcctgcagcggttggccgagcagcccatc
acgcgggtgggtctgtctgccacgcagaaaccgatcgacaccgtggcgcagtttctggtg
ggtgttggcgaggacggcgcggcggcgccgtgcgagatcgtggatatcggctacacccgt
cagcgcgatctggcattggcgctgccgcccacgccgttgagcgtggtgctgtccaacgac
caatggctgcaggtgtatgccgaggtcgctgcgctggcgcaacagcaccgtaccacgctg
gtgttcgtcaacacgcgccgcatggccgagcgggctgcgcgccacctgggcgagctgctg
ggcaagcagcgcgtggcggcgcatcacggcagcctgtcgcgcgagacgcggctactggcc
gagcgccgactcaaggccggcgaattgaccgtgctggtggccactgcgtcgctggagctg
ggcctggatatcggcgatgtagacctggtctgccaactcggctcaccgcgctcgatcgcc
accttcctgcagcgcgccggccggtccgggcatgcggtcggtggcacgccgaaggcgcgg
ctgttcccgcagacgcgcgacgagctggtcgaatgcgccgcgctgctggatggcatccgc
cgtggcgaactggatgccctgcggtttccgatcgcgccgatcgacgtgctggcgcagcag
atcgtcgccgaagccgcctgcgaagattgggacgaagatgcactgtttgcgctggtgcgc
cgcgcctggccattcgcaacgctgagccgcgccaccttcgatgcggtcgtgcggatgtta
tgcgagggcttcagcacccggttggggccacgcgctggctatctgcaccgcgatgcggtc
aatcgccgcctgcatgcgcggcgtggcgcgcgcatgaccgcgctcacctccggcggcacc
attcccgaaaccggcgattacagcgtggtgctggagccacaggcggaaaacatcggcacg
gtcaacgaggatttcgcggtcgaaagcctcaccggcgatgtcttccagcttggcaatgcg
agctaccgcatcctgcgcgtggatgcggacaaggtgcgggttgaagatgccaagggggcg
ccgcccaatattccgttctggttgggcgaggcgccgggccgcagcgatgcattgtcgctg
gcggtgtcgcgcctgcgcgaagaaattgccacgcggctcgacggtgcacggcatgccggc
gcacaggcatggctatgcgatgaggttgggttggccgcggagccggcgcagcaactggtg
gagtacctggcgaacgcctgtcaggcattgggtgcgatgccgacccagcactgcctggtg
atggagcggttcttcgatgccaccggcggcacccaattgatcatccactcgccctacggc
agccggatcaaccgcgcctggggcctggccttgcgcaagcggttctgccgcaccttcaat
ttcgaattgcaggccgccgcgaccgaggacgcgatcgtattgtcgctgtccaccagccat
agttttgcgctggaagaggtggcgcgttatctgcattccgcatcggccgagcacgtgctg
gtgcaggcgttgctggacgcaccgctgttcggtgtgcggtggcgctggaatgccaccaac
gcgatggcgctgccgcgcttttccggcggcaacaaggttgcgccgcaactgcagcggatg
aagtccgaagacctgttggccacggtgttcccggaccaggtggcatgtgcggagaatctg
gttggcgagcgcgaggtgccggaccatccgctggtggcgcaaacgctggaagattgcctg
catcaatcgatggatagcgagggttggctgcaggtgttgcgcggcctggagtccggcgcc
atcacgctggtggcacgtgatctggccgcgccgtcgccgctggcggcggaagccttgaat
gcacgtccgtacgcctttctcgacgatgcaccgctggaagagcggcgcacccaggcggtg
cagggcaggcgctacacgccgcagagcagcgatgatttgggacagctggatccgcaggca
attgctgccgtgcgcgaagaagcctggccgcagccacgcgatgccgaagagatgcatgag
gcgctggtgggcctgggtgtgttgccggtggaagaggccctcgatgcacagtggcaggca
tggctgtcggcgttgtcggcggccgggcgcgccacctgcctggcagtcgatggcggcact
gcactgtggatcagcgccgagcgcatcgagtggtttgcaccgttgtatccgcacgccgtg
gcgcagccgccgctgcaggcgccgccggattgccgtgtggacgactggcagcgcgagtgg
gcagtgcgcgagctggtgcgcggccgcctgtcggcggtggggccggcgcaggtgtctgcg
ctgtgcagcgcagtgcgcctgccggcagcggaggtcgaactcgccttgatcgggctgcag
cgcgaaggctatgtcatggcaggtcgcttcagtgcccaggcacttgaagaggaatggtgc
gagcggcatctactggcgcgcatccatcgctatacgctggggcgcttgcgccgtgagatc
gagccggtgtcgcagcgcgattacgcacgtttcctgttcgaatggcagcacctggatgcc
gaccaccgcgtggccgggccggacgcgctggccggcatcgttggccagctggaaggcttc
gaggcgccggccgcgctctgggaaagcgagctgttgcccgcgcgcgtgcgtgactaccaa
cccgcgtggctggacgaactgtgcaccgctggccgcacggtatgggcgcgcctgcgtcca
ggcggtggccgcagtggcaatgcgttgcgcggcacgccaatcgtgctgctgccgcggcgt
gaagcgcagcgctggaatgccctggcacgcgccgacgatgacgcgccgctgggctcgcgt
gcgcagcgcgtggtggaggtgctgcaggagcagggcgcgctgttcttcgacgagattgcc
gatgctgcgcggctgatggccaccgagctggaagatgtgctcagcgaactggtgatgcgc
gggcgcgtgcattgcgacagttatgccggcctgcgtgcactgctagtgccggcgtccaaa
cgcccctcggcactgtcgcggcaacgccggcgtgccagtgcgttgggcatccgcgatgcc
ggccgttgggcgccggtgcgcaacttgccgtcgctgcccttggccgaggccagcgagcgt
caccaggaaatgctggagcacgtggcgcgcgcgttgctgcgccgctatggcgtggtgtgt
tggcggctgcttgaacgcgaggccgcctggctgccgccctggcgcgaattactgcgtgtg
tatcagcggttggaagcgcgtggcgaactgcgtggcgggcgttttattgccggcgtgtcc
ggcgaacaattcgcgttgcccgatgccattgccgcgatgcgtcgcgtgcgcgcgcaaccg
ttggcgcaacagtggatctgcctcagcgcgagtgacccggccaatctgctcggcaatctg
ttgcccggcgagcgcatcgcgcgcgtgcccggcaatcgcgtggcgtttctggacggcctg
ccgatggccgcctggagcggcgatcgcttccagccgctgcaagagctctcacacgagcac
ggcgagcaggcattgcgattgctgcaacgtgggccgggcgccgccgagcagacgccactg
cagcaatggctcgctcagtcgccggttactgatgcgcgtgcgccgctcacacgtggcagc
ggacgcgacagatag

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