Xanthomonas campestris pv. campestris 8004: XC_2331
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Entry
XC_2331 CDS
T00247
Name
(GenBank) RpfB protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00061
Fatty acid biosynthesis
xcb00071
Fatty acid degradation
xcb01100
Metabolic pathways
xcb01212
Fatty acid metabolism
xcb02024
Quorum sensing
xcb04146
Peroxisome
Module
xcb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XC_2331
00071 Fatty acid degradation
XC_2331
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XC_2331
09145 Cellular community - prokaryotes
02024 Quorum sensing
XC_2331
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xcb01004
]
XC_2331
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcb04147
]
XC_2331
Enzymes [BR:
xcb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XC_2331
Lipid biosynthesis proteins [BR:
xcb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XC_2331
Exosome [BR:
xcb04147
]
Exosomal proteins
Exosomal proteins of breast milk
XC_2331
Exosomal proteins of breast cancer cells
XC_2331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAY49384
UniProt:
A0A0H2X9L8
LinkDB
All DBs
Position
2817882..2819564
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AA seq
560 aa
AA seq
DB search
MSQARPWLQSYPAGVAAEIDLEQFSTVAEVFATSVARFADRPAYHSFGKTITYREADQLV
DQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGILRAGLTVVNVNPLYTPRELKHQLI
DSGSSVLVVIDNFGTTVQQVIADTQVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY
RINGAIRFRDALALGRKHRVPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
HQWLAGTGKLEEGHEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELK
KTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEA
YGLTETSPAACINPMDLVDYNGSIGLPIPSTDACIKDDDGKVLALGEIGELCIKGPQVMK
GYWKKADETAKVMDAEGWLHTGDIARMDERGFVYIVDRKKDMILVSGFNVYPNEIEDVIA
TMPGVLEVAAVGVPDEKSGEIVKVVIVKKDQALTAEDVKAHCRTNLTGYKQPRVIEFRKE
LPKTNVGKILRRELRDAAKA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggcacgtccttggttgcaaagttatccggccggagtggccgcggagatcgat
ctggagcagttcagcaccgtggcggaggttttcgccacctcggtggcgcgcttcgctgat
cgtcccgcgtatcacagcttcggcaagaccattacctaccgcgaagcagatcagctggtc
gaccagttcgcggcctatctgctcggcgagttgcagctgaaaaaaggcgaccgcgtcgcc
ttgatgatgcccaactgcctgcaatacccgattgccaccttcggcatcctgcgcgccggt
ctgaccgtggtgaacgtcaacccgctctacaccccgcgcgagctcaagcaccagttgatc
gactcgggctccagcgtgctggtggtcatcgacaacttcggcaccactgtgcagcaagtg
atcgccgacacgcaggtcaagcaggtcatcaccaccggcctgggcgacatgctcgggttc
ccgaaagccgcactggtcaactttgtcgtcaagtacgtcaagaagctggtgccggagtac
cgcatcaacggcgcgatccgcttccgcgacgcgctggcactgggccgcaagcaccgcgtc
ccgaccctgcagatcgagccggacgacatcgcctttttgcagtacaccggcggcaccacc
ggcgtggccaagggcgcgatgctgacccaccgcaacctggtcgccaacatgcagcaggcg
caccagtggctggccggcaccggcaagctggaagaaggccacgaggtggtgatcaccgcg
ctgccgctgtaccacatcttcgcgttgacggcgaacggcctggtcttcatgaagatcggc
ggctgcaaccacctgatcagcaacccgcgcgacatgccgggcttcgtcaaggaactcaag
aagacccgcttcaccgcgtttaccggcgtcaatacgctgttcaatggcttgctcaatacg
cccggcttcgatcagatcgacttttcgtcgttgaagatgaccctcggcggcggcatggca
gtccagcgctcggtcgccgaacgctggaagcaggtgaccggcctgactctggtcgaggct
tacggcctgaccgagacctcgcccgccgcctgcatcaacccgatggatctggtcgactac
aacggctcgatcggcctgccgattccgtccaccgatgcctgcatcaaggacgacgacggc
aaggtgctggcgctgggcgagatcggcgagctgtgcatcaagggcccgcaggtgatgaag
ggctattggaagaaggccgacgagaccgccaaggtcatggacgccgaaggctggctgcac
accggcgacatcgcgcgcatggacgaacgtggcttcgtctatatcgtcgaccgcaagaag
gacatgatcctggtgtccggcttcaacgtgtaccccaacgagatcgaagacgtcatcgcg
acgatgccgggcgtgctcgaagtggccgcagtcggcgtgccggatgaaaagtccggcgaa
atcgtcaaggtggtgatcgtcaagaaagaccaggccctgaccgccgaggacgtaaaggcg
cactgccgcaccaacctgaccggctacaagcagccgcgcgtgatcgagttccgcaaggaa
ttgccgaagaccaacgtcggcaagatcctgcgtcgcgaattgcgggatgcggccaaggca
tag
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