Xanthomonas campestris pv. campestris 8004: XC_2527
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Entry
XC_2527 CDS
T00247
Name
(GenBank) hydrogenase subunit
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcb03016
]
XC_2527
Enzymes [BR:
xcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
XC_2527
Transfer RNA biogenesis [BR:
xcb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XC_2527
Prokaryotic type
XC_2527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
RST
Motif
Other DBs
NCBI-ProteinID:
AAY49577
UniProt:
Q4UTP6
LinkDB
All DBs
Position
complement(3058190..3059293)
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AA seq
367 aa
AA seq
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MSDSPVLPRAHGAAVLTAAMRSVAEDFQVDELPAFDASGEGEHLLLTVRKRGQNTAYVAK
RLAQWAGIAEMGIGYAGLKDRHAVTTQRFSVHLPKRIAPDLSALDDDDMQVVEHTWHNRK
LQRGALHGNRFVLTLREVVGDQAVIDARLHAIAARGIPNWFGEQRFGRDGGNVAAALAMF
GHTRQPDGTLAPAPKRRLRNDQRSLLLSAARSALFNQVLTARVEQGNWDAPLDGEAWMLD
GSRSVFGPEPWSEVLAERLARFDIHPSGPLWGAGELRCSADAAAIEQAALSDPQSLALRT
GLEAAGLKQERRALRLRPQGLAHAWLDAQTLQLTFALPPGCYATAVLWELGEVVDAARVA
PQSRSEG
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcacccgttttgccgcgcgcgcatggcgccgcggtgctcactgcggcaatg
cgcagcgttgccgaggatttccaggttgatgagttgcccgcgttcgatgcatcgggtgaa
ggcgagcatctgctgctgaccgtgcgcaagcgtggccagaacaccgcttacgtggccaag
cgtttggcgcagtgggccggcattgcggagatgggcattggctacgcgggtctgaaggac
cgccacgcggtgaccacgcaacgcttcagcgtgcatctgcccaagcgcatcgccccggac
ctgagtgcgctggacgatgacgacatgcaggtggtggagcacacctggcacaaccgcaag
ctgcagcgcggcgccttgcacggcaatcgcttcgtgctgacgctgcgtgaggtggtgggc
gatcaggcggtcattgatgcgcgcctgcacgcgatcgctgcgcgcggcatccccaactgg
tttggcgagcagcgcttcggccgcgatggtggcaatgtcgccgcggcattggcgatgttc
ggtcacacgcggcagccggatggcacgctcgcgcccgcacccaaacggcgcctgcgcaac
gatcaacgctcgctgctgttgtcggcagcacgctcggcactgttcaaccaggtgctgact
gcgcgcgtggaacagggcaattgggatgcgccactggacggcgaggcctggatgctggac
ggctcacgcagcgtgttcggtcccgaaccctggagcgaggtgttggccgagcgtctggcg
cgtttcgacattcatcccagcggcccgttgtggggcgccggcgaattacgctgcagcgct
gatgccgcggcgattgaacaggcggcactgtcggatccgcaatcgcttgcgttgcgcacg
ggcctggaagcggccggcctcaagcaggagcgccgcgcgctgcggctgcgtccgcagggg
ttggcacatgcctggctggacgcgcagacgctgcagctcaccttcgccttgccaccgggc
tgctacgcgactgcggtgttgtgggaactgggcgaggtcgtcgatgcagcgcgcgttgca
ccgcagtcgcgttccgagggctga
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