Xanthomonas campestris pv. campestris 8004: XC_2920
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Entry
XC_2920 CDS
T00247
Name
(GenBank) conserved hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcb03016
]
XC_2920
Enzymes [BR:
xcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
XC_2920
Transfer RNA biogenesis [BR:
xcb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
XC_2920
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AAY49968
UniProt:
A0A0H2X967
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All DBs
Position
complement(3505602..3506204)
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AA seq
200 aa
AA seq
DB search
MQQQFLYLSSAEAQLSLGLGEEKTTERLFFAVMADAATATHAAQIGSALLQAGLVEGKPL
APERLHVTLHHLGDYAGGLPPSLVARASQAAERVAQQPFEVEFDRVGTFGGRRSQLPCVL
RGEEQVRGLYDLQGALGRQLAHVGIAGDAQYTPHMTLLYCNQSLPQRRCDPLLWTVTNFA
LVRSFLGQSRYQIEGRWLLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagttcctgtacctgtcctccgccgaagcgcagctgtcgctgggcctgggc
gaagagaagaccaccgagcgcctgttttttgcggtgatggccgatgccgccactgccacg
catgccgcacagatcggcagtgcgctgcttcaggccgggctggtcgaaggcaagccgctg
gcgccggagcgcttgcatgtcaccttgcatcatctgggcgattacgccggcggcctgcca
ccatcgctggtggcgcgtgccagccaggcggccgaacgcgtggcgcagcaaccgttcgag
gtggagttcgaccgcgtgggcacattcggtgggcgccgctcgcaactgccgtgcgtgttg
cgtggcgaagagcaggtacgcgggctgtacgacctgcaaggcgcgctgggccggcaactg
gcgcacgtgggcattgccggcgatgcgcaatacaccccgcacatgaccttgctctactgc
aatcagtccctgccgcaacgccgctgcgacccgttgctctggaccgtcaccaacttcgcc
ctggtgcgcagctttcttggccagtcgcgttatcagatcgaagggcgctggttactgcgc
tga
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