KEGG   Xanthomonas campestris pv. campestris 8004: XC_2952
Entry
XC_2952           CDS       T00247                                 
Name
(GenBank) helicase-related protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcb03400]
    XC_2952
Enzymes [BR:xcb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XC_2952
    5.6.2.6  RNA 3'-5' helicase
     XC_2952
DNA repair and recombination proteins [BR:xcb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    XC_2952
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AAY50000
UniProt: A0A0H2X9N3
LinkDB
Position
3535877..3538369
AA seq 830 aa
MSPAPPQRGTPLQQWRAWFAQRGWAPLPFQRDVWKRYLDGESGLLHTPTGSGKTLAAFGG
PLLEALAARGRTPPATAVARGRRQPQRSLQVLWITPLRALAADTARALREPVEALGLDWQ
VGLRTGDASARDKRLARSGKLDVLVTTPESLALLLSYPDTAPQLAALRCVIVDEWHELLG
NKRGVLLQLCLARLRSWSPALRIWGLSATLGNLAQARDVLLPHQPDAALVSGVKPRAMTL
ETLLPETGERFPWAGHLGLAQLARVLHKLMEQRTSLVFTNTRAQAELWHQALSAVWPEDA
ATLALHHGSLDPALRTAAEHGLRDGSLRCVVATSSLDLGVDFPAVDQVLQVGSPKGIARL
LQRAGRARHRPGESGHVVCVPSHALELLEYAAARRAIAQGQIETRPPPRLSLDVLAQHCV
TLALGGGFQADALLREVRGTDAFATLDEATWQAVLDFIVQGGSALAHYPDFHKVVRDDAG
IYRVTDRRVALRHRLSIGTITSDGSVRVQFLRGGRLGAVEEQFVGRLKRGDRFQFAGRLL
ELVRLEDMTAYVRIAKGGSGVVPKWMGGRMPLSSALGREVEAVFADPGDAPEMHTLAPLL
QLQSSLSALPGPGHLLVETIKARDGRHLFVYPFAGRQVNEGLAALLAARWGRRQRNTFSF
AANDYGFVLSPAQDVPVDAALLQELLSPARLFEDLRDSLNLGELARRQFREIARVAGLLS
PSLPGRAPRSLRQLQASSGLLYDVLQRFDPEHLLLAQAEREVFEGQLEFARLASALEDCA
ARVLRLCTPRSLTPLSFPLWAERVRGQLSTEDWKARVLRAAAQLERKHGR
NT seq 2493 nt   +upstreamnt  +downstreamnt
gtgagcccggcaccgccacagcgcggcacgccgttgcagcaatggcgggcctggtttgcg
cagcgcggctgggcgccattgccgtttcaacgcgatgtctggaagcgctatctggatggc
gaatccggcctgctgcacaccccaaccggcagcggcaagaccctggcggcatttggcggc
ccgctgctggaagcgctggccgcacgcggacgcacaccgccggccacggcggtggcacgt
ggccggcggcagccgcagcgtagcctgcaggtgctgtggatcaccccgctgcgcgcactc
gctgccgataccgcgcgtgccctgcgcgaaccggtggaggccttgggcctggattggcag
gtgggcctgcgcaccggcgacgccagcgcgcgcgacaaacgcctggcccgcagcggcaag
ctcgatgtcctggtcactacgcccgaatcgctggccttgctgctgtcgtatccggatacc
gcgccgcagttggcggcgctgcgctgcgtgatcgtcgacgagtggcacgagctgctcggc
aacaagcgcggcgtgctgttgcaactgtgcctggcgcgcctgcgcagttggtcaccggcg
ctgcgcatctgggggttgtcggccacgctgggcaacctggcgcaggcacgcgatgtgctg
ctgccgcatcaaccggacgcggccttggtgtcgggggtcaagccacgcgccatgaccctg
gaaacgctgctgcccgagaccggcgagcgcttcccgtgggccggccatctcggtctggcg
caactggcgcgcgtgctgcacaaactgatggaacaacgcaccagcctggtgttcaccaac
acgcgcgcgcaggccgaactctggcaccaggcgctgagcgcagtgtggccggaggatgcg
gccacactggcgctgcaccatggctcgctggatccggcgctgcgcaccgcggccgaacac
ggcctgcgcgatggcagcctgcgttgcgtggtggccacctccagcctggacctgggcgtg
gactttccggcggtggatcaggtgctgcaagtcggcagccccaagggcatcgcacgcctg
ctgcaacgcgccggccgtgcacggcaccgcccgggcgaatccggccatgtggtgtgcgtg
ccctcgcatgcgctggaattgctggaatatgcggctgcgcggcgcgcgattgcacagggg
cagatcgagacacgcccgccaccgcggctttcattggacgtgctagcccagcattgcgtg
accctggcactgggcggcggtttccaggccgatgcgttgttgcgcgaagtccgcggtacc
gatgccttcgccacactcgatgaggccacctggcaggccgtgctcgacttcatcgtgcaa
ggcggcagcgcgctcgcgcactaccccgatttccacaaggtggtgcgcgacgacgccggc
atctaccgcgtcaccgaccggcgcgtggcgctgcggcatcgcctgtcgatcggcaccatc
accagcgatggcagcgtgcgcgtgcagttcctgcgcggcggccggctgggcgcggtggaa
gaacagttcgtcggtcgcctcaagcgcggcgaccgcttccagttcgccgggcgcttgctg
gaactggtgcggctggaagacatgaccgcctacgtgcgcatcgccaagggcggcagcgga
gtagtgcccaagtggatgggcgggaggatgccgttgtcctcggcgttggggcgcgaggtg
gaggcggtgttcgccgatcccggcgacgcgccggaaatgcacaccctggcgccgttgctg
cagttgcagtccagcctgtccgcactgcccggccccggccatctgctggtggaaaccatc
aaggcgcgcgatggccgccacctgttcgtgtacccgttcgcaggccgccaggtcaacgaa
ggtctggccgcattgctggctgcgcgctggggccggcggcagcgcaacaccttcagcttt
gcagccaacgattacgggtttgtgctgtcgccagcgcaggacgtgccggtggatgccgcg
ctgctgcaggaattgctgtcgccggcacggctgttcgaggacctgcgcgacagcctcaat
ctgggcgagctggcacgccggcagtttcgcgagattgcgcgcgtcgccgggctgctctcg
ccatcgctgcctgggcgtgcgccgcgcagcctgcgccagctgcaggcctccagtggcctg
ttgtacgacgtgctgcagcgcttcgacccggaacacctgctgctggcccaggccgagcgc
gaagtcttcgaaggccagctggaattcgcgcgcctggccagtgcgctggaagactgcgca
gcgcgcgtcttgcgcctgtgcacgccgcgcagcctgacgccgctgtcgtttccgctgtgg
gccgagcgcgtgcgtgggcaactcagtaccgaagactggaaagcacgcgtgctgcgtgca
gccgcgcaactggaacgcaagcatggccgatag

DBGET integrated database retrieval system