Xanthomonas campestris pv. campestris 8004: XC_2990
Help
Entry
XC_2990 CDS
T00247
Name
(GenBank) conserved hypothetical protein
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00511
Other glycan degradation
xcb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XC_2990
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
XC_2990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcb04147
]
XC_2990
Enzymes [BR:
xcb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
XC_2990
Exosome [BR:
xcb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
XC_2990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
F5_F8_type_C_2
CBM_AftD
DUF3999
GHL6
Motif
Other DBs
NCBI-ProteinID:
AAY50038
UniProt:
A0A0H2X9N1
LinkDB
All DBs
Position
complement(3583394..3585322)
Genome browser
AA seq
642 aa
AA seq
DB search
MIDRRTFLATGVVAATASFSASAARIVQTPRANGPAPWGALPSKRQLRWHRWEQYAFVHF
AMNTFTDKEWGYGDEDPRKFDPSDFLPDQIVAAAKAGNLKGLIFTAKHHDGFCLWPTRLT
EHCIRNSPYKSGKGDIVGEMAAACRRAGLAFGIYLSPWDRNHAEYGRPGYLDYFRKQIVE
LCTGYGDLFEFWFDGANGGDGYYGGARESRKIDAPAYYNWPRMIELVHQHQPMACTFDPL
GADIRWGGNEDGIAGDPSWPTMPNAPYTQENGNSGVRGAALWWPAETNTSIRPGWFYHAD
EDGKVRSPENLVRYFDTSVARGTNMNLNLPPDRRGRIPDHDVAVLKSFGDAIRASFAIDL
ARGAKASASASHGPGFEPARVLDRQPDSYWSAPDDVTTPTLTLELSALHSFDLIRLREYL
PLGVRVTRFAVEAEVDGQWRRLAEAQCIGAQRIVRLDRPVAARRVRLVVLEAPVCPAISE
FALFRAVAPVPVARPTANAPDVLSTAGWRVVEASAPGAEKLLDDDASTVWSTPAPTPGHP
VQATIDLGALHQVAGFSLTPSRTVMAGAAPPKGYRAETSEDGQHWQPAGSGELSNIAYAL
STQRLNFPEVRQIRYLRLSFAETAVPADRLAIAGIGAFSRLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgtcgtacctttcttgccacgggggtggttgccgctaccgccagcttcagt
gcatcggcggcgcggatcgtgcagacgccgcgtgccaacgggccggcgccgtggggtgcg
ctgcccagcaagcgacaactgcgctggcatcggtgggagcaatacgccttcgtgcatttt
gcgatgaacaccttcaccgacaaggaatggggctacggcgacgaggatccgcgcaaattc
gatcccagcgattttttacccgatcaaatcgttgctgctgccaaggctggcaatctgaaa
gggcttattttcacggccaagcaccacgatgggttctgtctttggccgacgcgcttgacc
gagcattgcatccggaactcgccctacaagagcggcaagggtgacatcgtcggcgaaatg
gcagcggcgtgtcgacgcgccggcctggcgttcggcatctacctctcgccctgggatcgc
aatcacgccgaatatggtcgccccggctatctcgactatttccgcaagcagatcgtcgag
ctctgcacaggctatggcgacctgttcgagttctggtttgacggcgccaatggcggcgac
ggctactacggtggagcgcgcgaatcgcgcaagatcgatgcgcccgcgtactacaactgg
ccacggatgatcgagctggtgcatcaacatcagccgatggcctgtaccttcgacccgctc
ggcgccgatatccgctggggcggcaacgaggatggtattgccggggatccatcctggccg
accatgcccaatgcgccgtatacccaggaaaacggtaattccggcgtgcgcggcgcggcg
ctgtggtggccggccgaaaccaacacctcgatccgcccgggctggttctaccatgccgat
gaagacggcaaggtgcgtagcccggagaatctggtgcgctatttcgacacctccgtcgcg
cgcggcaccaacatgaacctcaatcttccgcccgaccgacgcggccgcatccccgaccac
gacgtggcggtgctgaagagtttcggcgacgcgatccgcgccagcttcgccatcgatctg
gccaggggtgccaaggccagtgccagcgcatcgcatggccctgggttcgagccggcgcgc
gtcctcgaccgccagccggacagctactggtccgctccggacgatgtcaccacgccgacg
ctgacgctggagctgtcggcgctgcacagtttcgacctgatccggctgcgcgaatatctg
ccgctgggcgtgcgcgtcacccgctttgcggtcgaagccgaggtcgatgggcaatggcgt
cggctggccgaagcgcagtgcatcggtgcccagcgcatcgtgcggctggatcgcccggtc
gccgcgcgccgggtgcgcctggtggtgcttgaggcgccggtgtgcccggcaatcagcgaa
ttcgcgctgttccgcgccgttgcgccagtgccggtcgcgcggcctacagcgaacgcacca
gatgtgctgtccaccgccggctggcgagtggtcgaggcgagcgcgccaggggcggaaaaa
ttgctcgacgacgatgccagcacggtctggagtacgcccgcgccgacgccgggccatccc
gtgcaggccaccatcgacctcggtgcgctgcatcaggttgccggcttcagcctcacgccc
tcgcgcacggtgatggccggtgcggcaccgccgaagggctatcgcgctgaaaccagcgaa
gatgggcagcactggcagccggccggtagtggtgagctgtccaatatcgcctatgcgctc
tcgacccagcgcctgaattttcccgaggtccgccagattcgctacctgcggctgtcgttc
gcggaaacggcggtgcccgccgaccggttggcgatcgcgggtatcggcgcgttctcgcgc
ttgcgatga
DBGET
integrated database retrieval system
