KEGG   Xanthomonas campestris pv. campestris 8004: XC_3025
Entry
XC_3025           CDS       T00247                                 
Name
(GenBank) HrpF protein
  KO
K18376  type III secretion translocon protein HrpF
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Module
xcb_M00660  Xanthomonas spp. pathogenicity signature, T3SS and effectors
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xcb02044]
    XC_3025
Secretion system [BR:xcb02044]
 Type III secretion system
  Type III secretion related proteins
   XC_3025
SSDB
Motif
Pfam: NolX T3SS_HrpK1 Ribosomal_uS5m_N
Other DBs
NCBI-ProteinID: AAY50073
UniProt: A0A0H2X9T4
LinkDB
Position
complement(3616676..3619441)
AA seq 921 aa
MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG
NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV
TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF
AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW
DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM
ASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD
GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP
ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT
EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ
WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV
KDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY
EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW
DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGI
NMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIA
KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA
IADNFEADTKENLRHVRGRRK
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgtcgctcaacacgctttcgaccgggagtaccgccggtctgtttctacctctgacggat
gacgcgtcgtccccggggctgctcggatccgattcggccatgaatgactccgatctgttg
ctggcgatggacaacctgtttctgcagcagatttaccgtttgattgccgccacctacggc
aatacgtcgctcaatgggccaggcagtggtattccggggcttgacacgccttcagcagac
gaccttcaagccagccagccgattgagaaacggacctcctggccgacgctatcggctccg
ttcaatgtcaaggacatcaagggatccaggttgccgcctgcggtggatgggtcatcggtg
acctgggagggcggcacgctcaccccatcggagcttcagattgtttcgacactcaatcag
cacaaagacaagacgccgctggagttcgcaaaactcgacgacaagatcaatgatccatct
acacctccggatctgaagagtgcgctgcaaggcttgcagaaagatccgcgtcttttcttc
gccatcggttcgcagggcgacggcaaatgcggcggcaagatcaaggcgggtgatttgtgg
gattttgcagaccaccatcaacaggtgaccgctctgggcgggaagaatgccgagttcaat
cctaaaaacatcaagggagcgacaccgcctcctgccgcagaaggttcgtcggtaacctgg
gacggcggcacgctgacgcaatcccagcttgagatcgtctctacgctcaatcagcatcgc
gacatgatgccgatcgagttcgccaagctcgatgaaaagatcaacgacccagccactccg
cccgacctgaaaaaagcgctgcagggcctgcaacaggatcctggcctgttctttgcgatg
gcgtctcagggtcacggcaagcaccaccacgacgaccagggcaagtgcaatggcaagctc
atcgccgacaatctttacgacttcgccgaccgccatccgcaggtgacggcgcagggcggc
aagaacgcgacctacaatcccgaaaaaatgaaggggcgcgacctgccgccgccggtggac
ggctcttcggtcacgtgggatggcgggacgctcacccagaacgaattggagatcgtcgcc
acacttaatcgccacaaggacaagtgcccagtcaagtggacagatctcgatgcaaagtcg
aaggatcccgccatcccgccggatctgcaaaaagcgtttgcagatctacagcaagatcca
gctctttttcatgcaattggtgcgcagggtagcaaaggaagttgcgatggaaaattcact
gaaaaggatctcacacgcttttcagtgcccgaaaaacacgcacagatcgctcaatatgcc
gagcagcaagcaaagggctacacgcaaaactatgtggcgtctgacagccccgacaagacc
gagccgacggtcatgaccgagagtgacgcgatgcgtgaactctaccgctactcggactat
ctgcccaaggatctaaaccaggacgcgttcaagcaattggtcgaaggcgatagcacgacc
aagaagagcccgccgcaggtcattgccgccgcacagtattttcgtgagcatcccgaccag
tggaaagcgctggctggcgacaaagagtcgatgagcacggcagatttcctgcagaaatct
acatcagagatgcacctgaccgcgcccgaactgaaaacgctggacaccatcaatagccac
caggaagcgttcttcggcgacggcaaagaggtaacgcgcgacaagctcgacacgattgtc
aaggatgataaagccgaccccgcagtgcgcgacgcggccaagcaacttttgggcgacccg
ctactgttcggcttgttgaacaacgcgatcaccggctacaagaagccccacagcttcttc
ggtggtggccatgtcgtcgactcgggaaagatcagcaacaaagattttcagcagttctac
gagcacatgacggcggtcaacaaaaccctggatacaccgcccacgcatgcagccacatcg
cccgagcaaaagaaggccgtcgcggacatgctgatgggaaaagccgatcagcccgagatc
aagaggaaaaaacacgatgtcggtaccttcagcaagggattgcatgagtttctcaagtgg
gacagcaagatcctggatgggatttccgtagcacttagtgcaatgaacggcattcccctg
atcggcgaggttgccgatgcagcagcgctagcatttgagagcgaagcgcaggcagcacag
gtaattgataccgcactgcaaggtggcaacctgtcactcgcgtggaaactcgccggcatc
aatatggctggagcggtggttggcgccgttggcggacccacggccagactcgcagccaag
ggagcagccaagggggtcgccgagggcgcagccaagggagcgacccagggtacaaccaag
ggcgcggccaaaggaggcggcaagggagtagccgagcgggaaaaaccccttgatattgct
aaaggctacataataggtactagcatcaacaggccgactgaaatgttgaaaactcccgtg
ttggcaggcttgcactatgaagaagtgcggctggataaggagaagaaaaagggcgagatt
cgcaagaatctggaagcggcgggcggggtgccattggggaaacagtttattccaaaagca
attgccgacaacttcgaggcagacacgaaagaaaacctcaggcatgtgagggggcgccgc
aagtaa

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