Xanthomonas campestris pv. campestris 8004: XC_3259
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Entry
XC_3259 CDS
T00247
Name
(GenBank) murein hydrolase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xcb01011
]
XC_3259
Enzymes [BR:
xcb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
XC_3259
Peptidoglycan biosynthesis and degradation proteins [BR:
xcb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
XC_3259
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AAY50303
UniProt:
A0A0H2XAE7
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Position
3900122..3901288
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AA seq
388 aa
AA seq
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MRRLLLGVLAALSAAAPVAGSASEPSTSSTVSSPAPAVRNGRDIFASFLEGRADPGCDTE
HSDRRWEQHFSRAPARLADDGQDVLPLFGYVVDQLREADMPTEFALIPFVESGYRPGARN
GSGPAGLWQFIATTARNHHVPVGAQYDGRLSAVDSTTAAVRYLKTLYGMFGGDWRLALMA
YNAGEYRVLQAMRSAGMNAQNARPAELPGMSKVTYEYVEKLHTLACVLDHAQEQGTLMTS
LDRPVPVLTEHALPAGTSLTTWAGQRALEPQLLARLNPAVASARAAPRGVHVLAPIAPAQ
PGSAGAVVALADRGALADTDDGNATTAVASVQTSKRSSARTHTVRNGESAWAIAKRYGIT
VTTLLASNGLDKRAVLKPGMVLSFEDSP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcctgcttctgggtgtgttggccgctctgtcggccgccgcaccggtcgccggc
tccgccagcgagccaagcacctcttccaccgtcagcagcccagcaccggccgtacgcaac
ggccgggatatctttgcctccttcctggaaggacgtgccgacccgggctgcgataccgag
cacagcgatcggcgttgggagcagcacttctcccgcgctccggcccgcctggccgatgat
ggccaggacgttctcccgctgttcggttacgtggtcgaccagctgcgcgaagccgacatg
cccaccgaattcgccctgattcccttcgtggaaagcggctaccggcccggcgcacgcaac
ggcagcggcccggcaggcctgtggcaattcatcgccactaccgcgcgcaatcaccacgtg
ccggtcggcgcccagtacgacggccgcctgtcggcggtggactccaccaccgcggcagtg
cgctatctcaagaccctgtacggcatgttcggcggcgactggcgcctggcgctcatggcc
tacaacgctggcgaataccgcgtcttgcaggccatgcgcagcgccggcatgaatgcgcag
aacgcccggccggccgagttgccaggcatgtccaaggtcacctacgaatacgtggaaaag
ctgcacacgctggcgtgcgtgcttgaccatgcgcaggagcaagggaccttgatgacgtcg
ctggatcgcccggtgccagtgctgaccgagcacgcattgccggccggcaccagcctcacc
acctgggctgggcaacgcgccctggaaccgcaactgctggcccgcctcaacccggcagtg
gccagcgcccgtgcagcgccgcgcggcgtgcatgtgctggcgccaatcgcgccagcacaa
ccggggtcagctggcgctgttgtcgccctggccgatcgcggcgcccttgcagatacggat
gacggcaatgccaccactgcggtggccagcgtccagacctccaagcgcagcagcgcgcgc
acgcacaccgtgcgtaatggcgagtccgcatgggccatcgccaagcgctacggaatcacg
gtcaccacgctgcttgccagcaatggcctggacaagcgcgcggtgttgaagccgggcatg
gtgctgtcgttcgaagattcgccctga
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