Xanthomonas campestris pv. campestris 8004: XC_3843
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Entry
XC_3843 CDS
T00247
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcb03021
]
XC_3843
Transcription machinery [BR:
xcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XC_3843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
KORA
HTH_3
HTH_11
UCR_14kD
HTH_10
HTH_25
GntR
Motif
Other DBs
NCBI-ProteinID:
AAY50883
UniProt:
A0A0H2XDA9
LinkDB
All DBs
Position
complement(4540650..4541525)
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AA seq
291 aa
AA seq
DB search
MNQITSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAAREL
VHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPEMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMES
RLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMAGLD
TRSRDIVKRRWLDSESKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagatcacctcgactgcccttgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgag
gaacagaatctggcccgccgcttccgcgacgagctggatctggacgcagcgcgcgaattg
gtccactcccacctgcgcttcgtggtgcacgtggcccgcggttacaacggctacggcctg
ccgctgggcgacctgatccaggaaggcaatatcggcttgatgaaggcggtcaagcgcttc
gacccggaaatgggcgtgcgcctggtcagcttcgccgtgcattggatccgtgccgagatg
cacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgc
aagctgttcttcaacctgcgcaagtccaagacgcgcctgggctggctcaatgcctccgaa
gtgactgcggttgccaaggacttgaacgtctccgagcgtgaagtgatggagatggagtcg
cgcttgtccggtcgcgatatcggcttcgacgcttcgtcggacgaagacgatgaccacggc
ccgccgtcgccggtgagctacctcgtggccaacgaggaagacccgtcgcaggcttatgag
cggcacgacagcgaagacaatcagctgcagttgctgcgcgaaggcatggccggtctggat
acgcgctcgcgcgacatcgtcaagcgtcgctggctggattccgaatccaaggtgacattg
caggagctggccgacgagtacggcgtatccgccgagcgtattcgccagatcgaagcgaac
gcgctgaagaagatgaaggcgctgttcgtcgcctga
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