Xanthomonas campestris pv. campestris 8004: XC_3930
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Entry
XC_3930 CDS
T00247
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XC_3930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcb03400
]
XC_3930
Enzymes [BR:
xcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XC_3930
DNA repair and recombination proteins [BR:
xcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XC_3930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AAY50969
UniProt:
A0A0H2XC08
LinkDB
All DBs
Position
complement(4644505..4645305)
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AA seq
266 aa
AA seq
DB search
MRIISFNANGLRSAASKGFFEWFATQDADVLCIQETKAQEHQLAGPEFLPAGYKAWFRDA
STKKGYSGVAIYAKREPDEVRTALGWPEFDEEGRYIEARFGNLSVVSFYIPSGSSGELRQ
GYKFQVMEWLRPILSEWLASGRQYVLCGDWNIVRSALDIKNWKSNQKNSGCLPPERDWLN
GLCADLLDEADASNGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLVTPGLR
DKVQACSIYREQRFSDHAPYIVDYAE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcagtttcaacgccaatggcctgcggtcggccgccagtaaggggttcttc
gagtggttcgccacccaggacgcggatgtgctgtgcatccaggagaccaaggcgcaggaa
catcagctggccgggccggaattcctgcccgccggctacaaggcctggtttcgcgatgcc
agcaccaagaagggctacagcggcgtggcgatctacgccaagcgtgaacccgacgaggtg
cgcaccgcgctcggttggccggagttcgacgaagaaggccgctacatcgaggcccgcttc
ggcaacctcagcgtggtctctttctatatcccgtccggctcctcgggcgagttgcgccag
ggctacaaattccaggtcatggaatggctgcgcccgatcctgagcgaatggctggccagc
ggccggcagtacgtgctgtgcggcgactggaacatcgtgcgctcggcgctggacatcaag
aactggaagtccaaccagaagaactccggctgcctgccgcccgagcgcgactggctcaac
ggcctgtgcgccgacctgctggacgaggccgatgccagcaacgggcgcggctgggtggac
agctaccgcgtgctgcatccgcagggcgaggactacacctggtggagcaaccgcggcgct
gcccgcgccaataacgtgggttggcgcatcgactaccaactggtcacccccgggctgcgc
gataaggtgcaggcttgttcgatctaccgcgagcagcgtttctccgaccacgccccttac
atcgtggattacgcggagtga
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