Xanthomonas campestris pv. campestris 8004: XC_4289
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Entry
XC_4289 CDS
T00247
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XC_4289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcb03400
]
XC_4289
Enzymes [BR:
xcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XC_4289
DNA repair and recombination proteins [BR:
xcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XC_4289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AAY51324
UniProt:
A0A0H2XEP4
LinkDB
All DBs
Position
complement(5085847..5089251)
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AA seq
1134 aa
AA seq
DB search
MHATSAPDFRLYPSNALDTLAALLAEELRRPVPEQPVLQPEVVLIPQVAMRRWLQSTLAA
EHGVAANLEFLTPGEFVARALERNLGPADDDLDMATTQWRLYQTLQGELGSDAALAPLAG
YLADGDALKPWALAGELGSVFEKYQAWRRDWLLRWESGADADDPQARLWRSIAGGRQYRA
RRIGQYLDRYARPDGPLPQGLPKRLFAFAILNVSPDVLRVLATQARVGTLHFYLPTPTQG
YWGDLQTLWQRRREGGAVALFAEQVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEIAAY
ADPLDAGRRTLAEGGLGDSLLRRMQSDLFHRHAPAVPPVLPAVNLHDPSLQVHACHTRLR
ELQVLHDQLRALLDDARFDPPLQPREIAVLSPDIDPYVPYLDAVFGGHGSDDGLPYALAD
ASPLASEPLADVFLTLLGLPISRFGLHEILDLLASAPIAEAAGLDEAGLERLRGWLHGAG
ARWGLDAVHRRQHQAPGDDAYTWRFALDRLLLGHASGAEDDIDGVAPWPQLEGSALAALD
TLLRLLRVLDRHQAALAEAMTPVQWRECLLGLLEALIPAAPSAPRAQRALERLRTLIDQF
ARDAVRAEYAGNVPAEVVRAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLG
MNDGDFPRRDPAAGLNRLTAELGTERRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGA
DARDGTVREPSVLVSELLGSAAQYHADPKAIDALVVRHPLQPFAAAAFGAVGEDGADPRR
FSYRRQWRPAVDSLAGQRQPLAPWVAGALPADASVLPASVSIDDLRRLFADPAGQFLRHR
LGMRLPDPAGEDSDLEPLLAPTRGLEQYGLQQQVFEAALAGDADGLYERLRARALLPSGP
LGRRQLDERLRQLRPYADVFRQWRGEAPAQSQRLQVEIDGTNVHGRVPGWYANGVGRVQV
GALSGRSAIRDGLEWLLLRAAGERVPFVRFFEHDDSLGPHPIDPEPLSQTQARAALGELL
QLYRQGLQTPLAFAPYSSWKYHQAARNDELDKAIKDAHGQWQSSFGWSESHSPELRLVTR
GRDPFGDAQQFVDFARTSHQLFALLEDGSAPAPLDPARVIESWRQWRGAQDDAE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccacgtccgcgcccgatttccgtctgtacccgtccaacgcgctggataccctg
gccgccttgctcgccgaagaactgcgccggccggtgccggaacaaccggtgttgcagccg
gaggtggtgctgattccgcaggtggcgatgcggcgctggctgcagtccacgctggcggcc
gagcacggggtggcggcgaatctggaattcctcacgcccggcgaattcgtcgcgcgcgcg
ctggagcgcaatctcggcccggccgacgacgacctggacatggccaccacgcagtggcgc
ctgtaccagaccctgcaaggcgagctgggcagcgatgcggcgttggcgccgttggccggg
tatctggccgatggcgatgcgctcaagccgtgggcgctggccggcgagctgggcagcgtg
ttcgagaaataccaggcctggcggcgcgactggttgctgcgctgggaaagcggtgccgac
gcggacgacccgcaggcgcggctgtggcgcagcatcgccggcgggcggcagtaccgtgcg
cgccgcatcggccagtatctggaccgttatgcgcgcccggacggcccgctgccgcagggt
ttgccgaagcggttgtttgccttcgccatcctcaatgtgtccccggacgtgctgcgcgtg
ctggccacgcaggcgcgggtgggtacgctgcatttctatctgcccacgcccacgcaaggc
tattggggcgatctgcagacgctgtggcagcgccgccgcgagggcggggcggtggcgttg
ttcgccgagcaggtgcaggaaaacccgttgctgcaggcctggggcgcggccgggcgcgat
ttcatggcattggtcggcgattacgaagtggtgcacccgctggccgagatcgccgcctac
gccgacccgctggacgccggccgtcgcacgctggccgagggtggcctgggcgacagcctg
ctgcggcgcatgcagagcgacctgttccatcgccacgccccggccgtgccgcccgtgttg
ccggcggtgaacctgcacgaccccagcctgcaggtgcacgcctgccacacgcggttgcgc
gagctgcaggtgctgcacgaccaactgcgcgcgttgctggacgatgcgcgcttcgacccg
ccgctgcagccgcgcgagatcgcggtgctgtcgccggacatcgacccgtacgtgccgtat
ctggacgcggtgttcggtggccatggcagcgatgacgggctgccgtacgcactggccgac
gccagcccgctggccagcgagccgttggccgatgtgttcctcaccttgctgggcctgccg
atttcgcgctttggcctgcacgagatcctggacctgctggccagtgcaccgatcgccgag
gccgccgggctggacgaagccgggctggagcgcctgcgtggctggctgcacggcgccggc
gcgcgctgggggctggatgcggtgcaccggcgccagcaccaggcgcctggcgacgatgcc
tacacctggcgctttgcgctggaccgcctgctgctcggccatgccagcggtgccgaggac
gacatcgacggcgtggcgccctggccgcagctggaaggcagcgcgctggccgcgctggac
accttgctgcggctgctgcgcgtgctcgatcgccaccaggccgcgctggccgaggcgatg
acgccggtgcagtggcgcgaatgcctgctcggcctgctggaggcgctgatcccggccgcc
ccctcggcgccgcgggcgcagcgcgcgctggagcggctacgtaccttgatcgaccagttc
gcccgcgacgcggtgcgcgccgagtacgccggcaacgtgccagccgaggtggtgcgtgcg
cactttgccgcggtgctgggcgagtcggacacgcgcgcgccgctgctcaccggcggcatc
agcttcggccgcatggtgccgatgcgcctgctgccgttccgcgccatctgcctgctgggc
atgaacgatggcgacttcccgcgccgcgacccggctgccgggctcaatcgcctcaccgcc
gaactgggcaccgagcgccgccgccatggcgaccgctccacccgcgaagacgatcgcttt
ttgttcctgcagttgttcgcctccgcgcaggaggtgttctatctcagctatctcggtgcc
gatgcgcgcgatggcacggtgcgcgaaccctcggtgctggtgagcgagctgctgggcagc
gccgcgcagtaccacgccgatccaaaggcgatcgatgcgctggtggtgcgccacccgttg
cagccgttcgctgccgccgcgtttggtgcggtgggcgaagacggtgccgacccgcgccgt
ttcagctaccgccggcaatggcggccggcggtagacagcctggccgggcaacgccagccg
ctggcgccgtgggtggccggtgcgttgccggccgacgccagcgtattgccggccagtgtc
tcgatcgacgacctgcgccgcctgttcgccgacccggccgggcagttcctgcgccatcgc
ctgggcatgcggctgccggacccggctggcgaagacagcgacctggagccgctgctggcg
cccacccgcgggctggagcagtacggcttgcagcagcaggtgttcgaagccgccttggcg
ggcgatgccgacggcctgtacgagcgcttgcgtgcgcgcgcactgctgccatcgggccca
ttggggcggcgccagctcgatgagcgcctgcgtcagctgcgcccgtatgccgacgtattt
cggcagtggcgtggcgaggcaccggcgcagtcgcagcggctgcaggtggagatcgacggt
accaacgtccacggccgcgtgcccgggtggtatgcgaacggggtagggcgtgtgcaggtg
ggcgcgctcagcggccgcagcgcgattcgcgacggcctggaatggctgctgctgcgcgcg
gccggcgagcgcgtgccgttcgtgcgtttcttcgagcacgacgacagcctgggcccgcat
ccgatcgaccccgagccgctgtcgcagacgcaggcacgcgcggccctgggcgaattgctg
cagctgtaccggcaaggcctgcagacgccgctggcgttcgcgccgtacagcagctggaaa
taccaccaggccgcccgcaacgacgaactggacaaggccatcaaggacgcgcacggccag
tggcaatcgagtttcggctggagcgaatcgcacagcccggagctgcgcctggtcacccgt
ggccgcgacccgttcggtgatgcgcagcagttcgttgacttcgcccgcaccagccatcag
ctgttcgcgctgctcgaagacggcagcgcgccggcaccgctggatcccgcgcgcgtgatc
gagagctggcgccagtggcgtggcgcgcaggacgacgccgaatga
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