Xanthomonas campestris pv. campestris ATCC 33913: XCC0472
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Entry
XCC0472 CDS
T00083
Symbol
clp
Name
(GenBank) CAP-like protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc02020
Two-component system
xcc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XCC0472 (clp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCC0472 (clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcc03000
]
XCC0472 (clp)
Transcription factors [BR:
xcc03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
XCC0472 (clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Crp
HTH_Crp_2
HVO_A0261_N
HTH_28
SgrR_N
HTH_11
MarR
GntR
Motif
Other DBs
NCBI-ProteinID:
AAM39790
UniProt:
P22260
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(573623..574315)
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AA seq
230 aa
AA seq
DB search
MSLGNTTVVTTTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVIS
GSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISYERLQQ
LFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSH
PQGTQLRVSRQELARLVGCSREMAGRVLKKLQADGLLHARGKTVVLYGTR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagcctagggaacacgacggttgtgactacgacggtacgtaacgctaccccctcactg
acgctggacgcgggcaccattgagcgattcctggcgcacagccaccgcaggcgctatccg
acccggaccgatgtgttccggccgggagaccccgctggcaccctctactacgtgatcagc
ggctcggtgagcatcattgccgaggaagatgacgatcgtgagttggtgctgggctacttc
ggtagcggcgagttcgttggtgagatggggttgttcatcgaatccgatacgcgcgaagtg
atcctgcgcacccgcacgcaatgcgagttggctgaaatcagctacgagcgcctgcagcag
ctgtttcagacgagtttgtcgccggatgcgccgcgaatcctgtacgccattggcgttcag
ctttcaaaacgcctgctcgataccacaaggaaagccagccgcctggcgttcctggatgtg
accgatcgcatcgtgcgcacgctgcacgatctgtcgaaggagccggaggcgatgagccat
ccgcagggtacgcagttgcgcgtctcgcggcaggaactcgcgcgcctggtcggctgctcg
cgcgaaatggccggacgcgtcctgaagaaattgcaggccgatggcctgttgcatgcacgc
ggcaagaccgtcgtgttgtacggcacgcgctaa
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