Xanthomonas campestris pv. campestris ATCC 33913: XCC0544
Help
Entry
XCC0544 CDS
T00083
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00010
Glycolysis / Gluconeogenesis
xcc00020
Citrate cycle (TCA cycle)
xcc00260
Glycine, serine and threonine metabolism
xcc00280
Valine, leucine and isoleucine degradation
xcc00310
Lysine degradation
xcc00380
Tryptophan metabolism
xcc00620
Pyruvate metabolism
xcc00630
Glyoxylate and dicarboxylate metabolism
xcc00640
Propanoate metabolism
xcc00670
One carbon pool by folate
xcc00785
Lipoic acid metabolism
xcc01100
Metabolic pathways
xcc01110
Biosynthesis of secondary metabolites
xcc01120
Microbial metabolism in diverse environments
xcc01200
Carbon metabolism
xcc01210
2-Oxocarboxylic acid metabolism
xcc01240
Biosynthesis of cofactors
Module
xcc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xcc_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
xcc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xcc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
XCC0544 (lpdA)
00020 Citrate cycle (TCA cycle)
XCC0544 (lpdA)
00620 Pyruvate metabolism
XCC0544 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
XCC0544 (lpdA)
00640 Propanoate metabolism
XCC0544 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XCC0544 (lpdA)
00280 Valine, leucine and isoleucine degradation
XCC0544 (lpdA)
00310 Lysine degradation
XCC0544 (lpdA)
00380 Tryptophan metabolism
XCC0544 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XCC0544 (lpdA)
00670 One carbon pool by folate
XCC0544 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcc04147
]
XCC0544 (lpdA)
Enzymes [BR:
xcc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
XCC0544 (lpdA)
Exosome [BR:
xcc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
XCC0544 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
GIDA
DAO
HI0933_like
NAD_binding_8
BSH_YknX
AlaDh_PNT_C
FAD_binding_2
Thi4
3HCDH_N
BSH_CusB
FAD_binding_3
MCRA
BSH_Fcp1
DUF478
Amino_oxidase
2-Hacid_dh_C
XpsN
GCV_H
Motif
Other DBs
NCBI-ProteinID:
AAM39860
UniProt:
Q8PD04
LinkDB
All DBs
Position
658992..660839
Genome browser
AA seq
615 aa
AA seq
DB search
MAVIEIKVPDIGDYSDVPVIEVLVAVGDSVVKDQGLVTLESDKATLEVPSSAAGVVKELK
VKIGDNLSEGAVVLLLETEGEAAAAPAAPKAETKAETKAAAPAAAPAAAAPGSKPPVTPS
HRAPAEPAASKPALASGKAADIECKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGG
VCLNVGCIPSKALLHAAAVIDEVAHAGDFGVDFGQPKITLDKLREYKEKVVGKLTGGLAS
MAKQRKVRTVTGVASFVSPNELEIVGDDGKTQLLRFEHCIIAAGSQAVKLPNFPWDDKRV
MDSTDALELHDIPKTLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPL
ADRLKKQGVEVHLKTKATDVSADAKGITVSFEAATEGEKPGLQATAFDRVLVAVGRSPNG
KKIGADKAGVTVTERGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAG
EKKEWVARVIPSVAYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFT
KLIFDEETHRIIGGAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAE
VYDGTITDLYIPKKK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcattgaaatcaaggttccggacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccgttggcgacagcgtggtcaaggaccagggcctggtgacgctggag
tcggacaaggccacgctggaagtgccgtcctcggccgccggtgtggtgaaggaactcaag
gtcaagattggcgacaacctgtccgaaggggcagtggtgttgctgctggagaccgaaggc
gaggccgctgccgcacccgccgcgccgaaggccgagaccaaggccgagaccaaggccgct
gcgcctgctgcggcccccgcggccgccgcacccggcagcaagccgccggtgaccccgtcg
caccgcgccccggccgaaccggccgcgtccaagccggcgctggccagcggcaaggccgcc
gatatcgaatgcaagatggtggtgcttggcgccggccctggcggctacaccgccgcgttc
cgcgctgccgacctgggcctggacacggtgctgatcgagcgctacgccagcctgggcggc
gtctgcctcaacgtcggctgcatcccgtccaaggcgctgctgcacgccgccgcggtgatc
gatgaagtggcccacgccggcgacttcggcgtggacttcggccagcccaagatcaccctg
gacaagctgcgcgagtacaaggaaaaagtggtcggcaagctcaccggcggcctggccagc
atggccaagcagcgcaaggtgcgcaccgtcaccggcgtggccagcttcgtctcgcccaac
gagctggagatcgtcggcgacgacggcaagacccagttgctgcgcttcgagcactgcatc
attgccgccggttcgcaggcggtgaagctgccgaacttcccgtgggacgacaagcgcgtg
atggactccaccgacgcgctggaactgcacgacatccccaagaccctgctcgtggtcggc
ggcggcatcatcggcctggaaatggccacggtgtacagcgcgctgggcagcaaggtcacc
gtggtcgagttcatggatcagctgatgccgggcgccgacaaggacctggtcaagccactg
gccgaccgcctgaagaagcagggcgtcgaggtccatctcaagaccaaggccaccgacgtc
agcgccgatgccaagggcatcacggtgtcgttcgaagcggccaccgaaggcgaaaagcct
ggcctgcaggccaccgccttcgatcgggtgctggtcgcggtgggtcgctcgcccaacggc
aagaagatcggcgctgacaaggccggcgtcaccgtcaccgaacgcggctttatcccggtg
gaccggcagatgcgcaccaacgtgccgcacatcttcgccatcggcgacatcgtcggtaac
ccgatgctggcgcacaaggccacccacgagggcaagttggccgccgaagtggccgccggc
gagaagaaggaatgggtggcgcgggtgattccgtcggttgcctataccaatccggaaatc
gcctgggtgggcgtcaccgaaaccgaggccaaggccaagggcttgaaggtgggcgtggcc
aagttcccgtgggccgccagcggccgtgcgatcggcatcggccgcaccgaaggcttcacc
aagctgatcttcgacgaagagactcaccgcatcattggtggtgcgatcgtcggcgtgcat
gccggtgatctgctggccgaaatcggcctggccatcgagatgggcgccgaagccgaagac
atcggccacaccatccatgcgcacccgaccctgagcgagtcggtcggcatggcggccgag
gtgtacgacggcaccatcaccgatctgtacattcccaagaagaagtaa
DBGET
integrated database retrieval system
