Xanthomonas campestris pv. campestris ATCC 33913: XCC1266
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Entry
XCC1266 CDS
T00083
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00071
Fatty acid degradation
xcc00280
Valine, leucine and isoleucine degradation
xcc00310
Lysine degradation
xcc00362
Benzoate degradation
xcc00380
Tryptophan metabolism
xcc00410
beta-Alanine metabolism
xcc00640
Propanoate metabolism
xcc00650
Butanoate metabolism
xcc00907
Pinene, camphor and geraniol degradation
xcc00930
Caprolactam degradation
xcc01100
Metabolic pathways
xcc01110
Biosynthesis of secondary metabolites
xcc01120
Microbial metabolism in diverse environments
xcc01200
Carbon metabolism
xcc01212
Fatty acid metabolism
Module
xcc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XCC1266 (fadB)
00650 Butanoate metabolism
XCC1266 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XCC1266 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XCC1266 (fadB)
00310 Lysine degradation
XCC1266 (fadB)
00380 Tryptophan metabolism
XCC1266 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XCC1266 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XCC1266 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XCC1266 (fadB)
00930 Caprolactam degradation
XCC1266 (fadB)
Enzymes [BR:
xcc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XCC1266 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XCC1266 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XCC1266 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
ApbA
Pyr_redox_2
UDPG_MGDP_dh_N
MORN
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AAM40564
UniProt:
Q8PB58
LinkDB
All DBs
Position
complement(1481687..1483759)
Genome browser
AA seq
690 aa
AA seq
DB search
MLPGFDGLRFSHWQADLREDGVLVLSLDRQGAAVNAFSQDVLLELGDVIERLALDPPKGV
VLRSAKANGFIAGADLKEFQEFDRRGTVNDAIRRGQQVFQKLAELPCPTVAAIHGFCMGG
GTEIALACRYRVASDDGSTRIGLPETKLGIFPGWGGSARLPRLIGAPAAMDLMLTGRTVS
AKAARAMGLVDKVAAPAVLVDVAAALALAGTTRPFKQRATAWATNTLLARKLLAPQMRKQ
VARKARKEHYPAPYALITTWERAGGGGIQARLAAERKAVVKLASTPAARNLIRIFFLTER
LKALGGKDTGLPAIRHVHVVGAGVMGGDIAAWAAYKGFEVTLQDREQRFIDTALARGGEL
FGKRVKDETKRPAVAARLRGDLAGSGVAQADLIIEAIIENPQAKRDLYQSIEPHLKPDAL
LTTNTSSIPLTELRGHIQRPAQFAGLHYFNPVAMMPLVEIVQHDGLDPANVARLAAFCKA
LDKFPVPVAGTPGFLVNRVLFPYLLEASTAYAEGIPGPVLDKTAVKFGMPMGPIELIDTV
GLDVAAGVGAELAPFLGLPIPAALATVEAGKRGKKDGQGLYKWENGRAVKPEVASGYEVP
TDLEDRLILPLLNEAVACLHEGVVADADLLDAGVIFGTGFAPFRGGPIQHIRSVGADALL
ARLHALQARYGERFVPRPGWESPVLREPVA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaggtttcgacgggctccgattcagccattggcaggcagacctgcgcgaggac
ggcgtgctcgtgctcagcctcgaccgccagggcgcagcggtcaatgccttctcgcaggac
gtgctgctcgaactgggcgatgtcatcgaacgcctggcactggatccgcccaagggcgtg
gtgctgcgctcggccaaggccaatggcttcatcgccggcgccgacctgaaggaattccag
gaattcgaccgccgcggcaccgtcaacgacgcaattcggcgcggccagcaggtgttccag
aaactggccgagctgccctgccccacggtggccgccatccacggcttctgcatgggcggc
ggcaccgagattgcactggcctgccgctaccgggtggcctccgacgatggcagcacgcgc
atcgggctgccggaaaccaagctcggcatctttcccggctggggcggcagcgcccgcttg
ccgcgcctgatcggggcaccggcggcaatggacttgatgctcaccgggcgcacggtgtcg
gccaaggctgcgcgggcgatgggcctggtcgacaaggttgccgcaccggcggtgctggtg
gatgtggctgcggcgctggcattggccggcaccacgcgcccgttcaagcaacgcgccacc
gcctgggcgaccaacactctgctcgcacgcaagctgctggcaccgcagatgcgcaagcag
gtcgcgcgcaaggcccgcaaggaacactatcccgcgccgtatgcgttgatcaccacgtgg
gagcgcgccggtggcggcgggatccaggcccgcctggcggccgagcgcaaggcagtggtc
aagcttgccagtacgccggcagcgcgcaatctgatccgcatcttcttcctgaccgagcgg
ctcaaggcccttggcggcaaggacaccggcttgcccgccatccgccacgtgcatgtcgtc
ggtgccggcgtgatgggcggtgatatcgcggcgtgggccgcctacaagggctttgaagtc
acgctgcaggaccgcgaacagcgcttcatcgataccgcccttgcgcgcggcggcgaacta
tttggcaagcgcgtaaaggacgagaccaagcgccccgccgtggccgcacgtctgcgcggc
gatctggccggcagcggcgtggcgcaggcggatctgatcattgaagcgatcatcgaaaac
ccgcaagccaagcgcgacctgtatcagagcatcgagccgcacctcaagccggatgcgcta
ctcaccaccaacacctcctcgatcccgttgaccgaattgcgtgggcacatccagcgcccg
gcacagtttgccggcctgcactatttcaacccggtggcgatgatgccgctggtggaaatc
gtgcagcacgacgggctggatccggccaacgtggcgcggctggccgcgttctgcaaggcg
ctggacaaattcccggtgccggtcgccggcacgccggggttcctggtcaaccgcgtgctg
ttcccgtacttgctggaagcgtccaccgcgtatgccgagggcattcccgggccggtgctg
gacaagaccgcggtgaagttcggcatgccgatggggccgatcgaattgatcgacaccgtg
ggcctggacgtggccgccggcgtcggtgcggagctcgccccgttcctgggcctgccgatc
ccggcagcactggccacggtggaggccggcaagcgcggcaagaaggacggccagggcttg
tacaaatgggaaaacggccgcgcggtcaaacccgaagttgccagcggctacgaggtgccg
acagacctggaagaccgcctgatcctgccattgctcaacgaagcggtggcctgcctgcac
gaaggcgtggtggccgatgcggacctgctcgatgccggcgtgatcttcggcaccggcttt
gcgcccttccgcggcggcccgatccagcacatccgcagcgtcggtgcagacgcgctgctg
gcccgcctgcatgccttgcaggcgcggtatggcgagcggtttgtaccgcggccgggttgg
gagtcgccagtgttgcgggagccggtggcataa
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