Xanthomonas campestris pv. campestris ATCC 33913: XCC1387
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Entry
XCC1387 CDS
T00083
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00300
Lysine biosynthesis
xcc01100
Metabolic pathways
xcc01120
Microbial metabolism in diverse environments
xcc01230
Biosynthesis of amino acids
Module
xcc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XCC1387 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xcc01002
]
XCC1387 (dapE)
Enzymes [BR:
xcc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
XCC1387 (dapE)
Peptidases and inhibitors [BR:
xcc01002
]
Metallo peptidases
Family M20
XCC1387 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AAM40685
UniProt:
Q8PAU0
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Position
1611765..1612964
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AA seq
399 aa
AA seq
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MVRVAACCTPTHALHAVPCQETLMTSDVLQLTCDLIARASVTPADAGCQALIADRLSAAG
FACEHLRLGAVDNLWATHGSGAPVLVLLGHTDVVPPGPASDWASDPFAPQVRDGVLYGRG
AADMKGSVAAFVVAAEQFVAAHPEHPGTLAVLLTSDEEGDAIDGVRHVARLFAERGQQID
WCITGEPSSTERLGDLLRVGRRGSLSGNLIVKGVQGHVAYPHKARNPIHLAAPALAELIA
RQWDDGFESFPPTSLQISNIHAGTGANNVIPGELQVAFNLRYTPHWNAETLEREIVALLE
RHALTYTLAWHRSGEPFYTPEGTLRRVAREVLGAFVGAPPEESTGGGTSDARFIAPLGAQ
CIEVGPVNASIHQVDEHVRVADLEALPALYRTLVERLLV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcgcgttgccgcatgctgcactcccacgcatgcgctgcatgcagtcccttgccaa
gagaccctgatgaccagcgacgtcctgcaactgacctgcgacctcatcgcacgcgcctcg
gtgacgcctgccgatgcgggctgccaggcgctcatcgccgatcgcctgagcgctgccggc
ttcgcgtgcgaacacctgcggctgggcgccgtcgataacctgtgggccacgcacggcagt
ggcgcgcccgtgctggtgttgctggggcacaccgacgtggtgccccccgggccggcgagc
gattgggccagcgacccattcgcgccgcaggtgcgcgatggcgtgttgtacggacgcggt
gcggccgatatgaaaggcagcgtggctgcgttcgtggtggctgccgagcagtttgtggct
gcccatccggagcatccgggcacgctggcggtgctgctgaccagcgacgaggaaggggac
gccatcgacggcgtgcgccatgtggcccggctgtttgccgagcgcggccagcagatcgac
tggtgcatcaccggtgagccatcgtccaccgagcggctgggcgatctgctgcgggtgggc
cgccgtggcagcctgtccggcaacctgatcgtcaagggcgtgcaaggccacgtggcgtac
ccgcacaaggcgcgcaatccgatccacctggcggcgcctgcgctggccgaattgatcgcg
cggcaatgggacgatggcttcgaaagcttcccgcctaccagcctgcagatttcaaatatc
cacgccggcactggcgccaataacgtgattcccggcgagctgcaggtggccttcaatctg
cgctacacgccgcactggaatgccgaaacgctcgagcgcgagatcgtcgcgctgctggag
cggcatgcgctgacttacacgctggcctggcatcgcagcggcgagccgttctacacgccc
gaaggcacgctgcggcgcgtggcccgcgaagtgctcggcgcatttgtcggtgcaccgccg
gaggagagcaccggcggcggcacctccgatgcgcgcttcatcgcaccgctgggtgcgcaa
tgcatcgaggtcggcccggtcaatgcatcgatccatcaggtggacgagcacgtgcgcgtg
gccgatctggaagcgctgccggcgctgtaccgcacgctcgtcgagcgtctgctggtctga
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