Xanthomonas campestris pv. campestris ATCC 33913: XCC1766
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Entry
XCC1766 CDS
T00083
Symbol
pcnB
Name
(GenBank) polynucleotide adenyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XCC1766 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcc03019
]
XCC1766 (pcnB)
Enzymes [BR:
xcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
XCC1766 (pcnB)
Messenger RNA biogenesis [BR:
xcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XCC1766 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
FXR_C1
Motif
Other DBs
NCBI-ProteinID:
AAM41056
UniProt:
Q8P9T2
LinkDB
All DBs
Position
2052382..2053749
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AA seq
455 aa
AA seq
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MGNPETRNGSATIEPSVTSPFTLRVIPRDQHTISRKDISPNALRVLYRLRESGFGAYLVG
GAVRDLLVGGHPKDFDVATSATPEEVKALFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
IDDGSGDRELDNGRLVRDNVYGTIEDDAIRRDFTCNALYYAIEDFSVRDYCGGFEDVQAR
LMKLIGDPELRYQEDPVRMLRAVRLAAKLNFDIEAGTAEPIPRLAGLLSEAAPARLFEEI
LKLFLSGHGVASFEGLERYGLLGALFPESAAALKSNRSGALRAMVLEGLRNTDARVANDE
PVSPAFLFALLLWPAFCRTLMGLQAQGVQPEDAQRRAADRVTLHQLERVALPRRFSLPMQ
EIWLLQTRFSSRQRKRVFRTLSHPRFRAAFDFLVLRQFASADHAADVEFWRDAQQSSGQE
LVDAIENAQADHDGDESAPRKRRRRRRRTGAAAGE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaatcctgaaacacgaaacggaagcgccaccatcgaaccttcagttacatccccg
ttcacgctgcgcgtcatcccacgcgaccagcacaccatctcgcgcaaggacatcagcccc
aacgcgttgcgcgtgctgtaccgcctgcgcgaatccggctttggcgcctacctggttggt
ggtgcggtgcgcgacctgctggtcggcggccaccccaaggacttcgacgtggccaccagc
gccacgccggaggaagtcaaggcgctgttccgcaattgccgcctgatcggccgccgcttc
cgcctggcgcatgtggtgttcggccgcgagatcatcgaagtcgccaccttccgcgccaat
atcgatgacggcagcggtgaccgcgagctggataacggccgcctggtgcgcgacaacgtc
tacggcaccatcgaagacgatgcgatccgccgcgacttcacctgcaacgcgctgtattac
gcgatcgaggatttctcggtgcgcgattactgcggcggcttcgaagacgtgcaggcgcgc
ttgatgaagttgatcggcgacccggagctgcgctaccaggaagatccggtgcgcatgctg
cgcgcggtgcgcctggcggccaagttgaacttcgacatcgaagccggcaccgccgagccg
atcccgcgcctggccgggctgttgtccgaagcggcgcccgcgcgtctgttcgaagaaatt
ctcaagctgttcctgtccgggcacggcgtggccagtttcgagggcctggagcgttatggc
ctgcttggggcgctgttccccgaaagtgcagccgcgctcaagtccaaccgcagcggcgct
ttgcgcgcgatggtgctggaaggcctgcgcaacaccgatgcacgcgtggccaatgatgag
ccggtgtcgccggcgttcctgttcgcgctgctgctgtggccggcgttctgccgcaccctg
atggggctgcaggcgcagggcgtgcagccggaagatgcgcagcgtcgcgccgccgatcgg
gtgaccttgcaccagctggagcgggtggccctgccgcgccgcttctcgctgccgatgcag
gaaatctggctgctgcagacccggttttcctcgcgccagcgcaaacgcgtgttccgcacc
ttgtcgcacccgcgcttccgggccgcgttcgacttcctggtgctgcgccagttcgcctcg
gccgaccatgccgccgatgtcgagttctggcgcgatgcgcagcagtcgtccggccaggag
ctggtggacgcgatcgagaacgcgcaggccgatcacgacggagatgagtcggcaccgcgc
aagcgtcgccgccgccgccgtcgtaccggcgccgccgcaggcgagtag
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