Xanthomonas campestris pv. campestris ATCC 33913: XCC1857
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Entry
XCC1857 CDS
T00083
Symbol
rpfF
Name
(GenBank) RpfF protein
KO
K13816
DSF synthase
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc02020
Two-component system
xcc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XCC1857 (rpfF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCC1857 (rpfF)
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Gene cluster
GFIT
Motif
Pfam:
ECH_1
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AAM41146
UniProt:
Q7CLS3
Structure
PDB
PDBj
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All DBs
Position
complement(2162301..2163170)
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AA seq
289 aa
AA seq
DB search
MSAVQPFIRTNIGSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLG
QRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVG
LGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRI
SAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKRTPHAWAAMQQVR
EMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRRSGLDAG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagttcaacccttcattcgtaccaatattggctcgaccctacgcatcatcgaa
gaaccgcagcgtgacgtttactggatccatatgcatgccgacctggccatcaatcccggg
cgggcctgtttctcgacacgcctggtcgacgacatcactggctaccagaccaacctggga
caacgcttgaatactgccggtgtgctggcgccgcacgtggtgctggcatcggacagcgac
gtgttcaatctgggcggtgatctggccctgttctgccaactgatccgcgaaggcgaccgc
gcccgccttctcgactacgcccaacgctgcgtgcgcggcgtgcatgcctttcatgtcggc
ctgggcgcgcgtgcgcacagcattgcgctggtccagggcaatgcgcttggcggcgggttc
gaagcggcactaagctgccacacgatcattgccgaggaaggcgtgatgatggggctgccc
gaagtgctgttcgacctatttccggggatgggcgcctactccttcatgtgccagcgcatc
agtgcgcacctggcgcaaaagatcatgcttgaaggcaacctgtattcggccgaacagctg
ctcggcatgggcctggtcgaccgtgtggtaccgcgtggccagggcgtggccgcagtggaa
caggtgatccgcgagagcaagcgcacgccacacgcgtgggcggcgatgcaacaagtgcgc
gaaatgaccaccgccgtgccgcttgaggagatgatgcgcatcaccgaaatctgggtagat
accgccatgcaactcggcgaaaaatcactgcgtaccatggaccgcctggtgcgcgcgcag
tcgcgtcgctcagggctcgacgcgggctga
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