Xanthomonas campestris pv. campestris ATCC 33913: XCC1860
Help
Entry
XCC1860 CDS
T00083
Symbol
rpfA
Name
(GenBank) aconitase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00020
Citrate cycle (TCA cycle)
xcc00630
Glyoxylate and dicarboxylate metabolism
xcc00640
Propanoate metabolism
xcc00720
Other carbon fixation pathways
xcc01100
Metabolic pathways
xcc01120
Microbial metabolism in diverse environments
xcc01200
Carbon metabolism
xcc01210
2-Oxocarboxylic acid metabolism
xcc01230
Biosynthesis of amino acids
Module
xcc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcc_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
xcc_M00012
Glyoxylate cycle
xcc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XCC1860 (rpfA)
00630 Glyoxylate and dicarboxylate metabolism
XCC1860 (rpfA)
00640 Propanoate metabolism
XCC1860 (rpfA)
09102 Energy metabolism
00720 Other carbon fixation pathways
XCC1860 (rpfA)
Enzymes [BR:
xcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
XCC1860 (rpfA)
4.2.1.99 2-methylisocitrate dehydratase
XCC1860 (rpfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AAM41149
UniProt:
Q8P9K3
LinkDB
All DBs
Position
complement(2165763..2168531)
Genome browser
AA seq
922 aa
AA seq
DB search
MSDSFSTRTSLEVNGQRYDYYSLPKLGERFDVARLPYSMKILLENLLRHEDGGVTVGKDH
IEAVAKWDPTAEPDIEIAFMPARVVLQDFTGVPCVVDLAAMRDAVVKLGGNADQINPQIP
SELVIDHSVQVDVFGKPEALDLNGKIEFQRNQERYGFLRWGQKAFDNFKVVPPNTGIVHQ
VNLENLARVVMSADKDGTQIAYPDTVFGTDSHTTMINGIGVLGWGVGGIEAEAAMLGQPS
SMLIPQVVGFKLTGKLPEGATATDLVLTVTQMLRKHGVVGKFVEFYGEGLQHLPLADRAT
IGNMAPEYGATCGIFPVDNESLTYLRLSGRSEEQIALVEAYAKAQGLWHDADTPHAQYSA
TLELDMGDVKPSLAGPKRPQDRVLLEDMQSNYRESLKPFAEARSKRLADTKQEDRLKNEG
GGGTAVGAKASQAESAGDSGAGWQLRDGSVVIAAITSCTNTSNPAVMLGAGLLARNAAAK
GLKAQPWVKTSLGPGSRVVTDYLSKAGVLADLEQLGFYVVGYGCTTCIGNSGPLPEDVSA
AIAKDDLVVTSVLSGNRNFEGRVHPEVKMNYLASPPLVVAYAIAGTTDIDLTRDPLGTGS
DGQPVYLRDIWPSNKEIGDTIAATVGPEMFKQNYADVFKGDTRWNTIASPDGALYEWDAG
STYIKNPPYFEGMTMQVGHVDDVHGARIMGLFGDSITTDHISPAGNIKKDSPAGRFLQER
GVQPADFNSYGSRRGNDDVMVRGTFANIRIKNLMFGGEEGGNTLYFGKDGATPEKLAIYD
AAMKYKADGVPLVVLAGKEYGTGSSRDWAAKGTNLLGVKAVVAESFERIHRSNLVGMGVL
PLQFLEGENAQTLGLDGSEVLDITGLQDGASRRATIDAKKSDGSVKQFQVKVLLLTPKEV
EYFKHGGLLQYVLRQLAARKAA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccttttccacccgcacctcgctagaggtcaacggccagcgctacgactac
tacagcctgcccaaactgggcgagcgcttcgatgtcgcccgcctgccctactcgatgaag
atcctgctggagaacctgctccggcatgaagacggtggcgtcaccgtcggcaaggaccac
atcgaagcggtcgccaagtgggacccgaccgccgaacccgatatcgaaatcgccttcatg
ccggcgcgcgtggtgctgcaggacttcaccggcgtgccctgcgtggtcgacctggccgcg
atgcgcgatgcggtggtcaagctcggcggcaatgccgaccagatcaatccgcagattccc
tccgaactggtcatcgaccactcggtgcaggtggacgtgttcggtaagcccgaggcgctg
gacctcaacggcaagatcgaattccagcgtaaccaggagcgctacggcttcctgcgctgg
ggccagaaggccttcgacaacttcaaggtggtgccgcccaacactggcatcgtccaccag
gtgaacctggagaatctggcacgcgtggtgatgagcgcggacaaggacggcacccagatc
gcctatccggacaccgtgttcggcaccgacagccataccaccatgatcaacggtatcggc
gtgctgggctggggcgtgggcggcatcgaggcggaagcggcgatgctcggccagccctcc
tccatgctgattccgcaggtggtgggcttcaagctcaccggcaagctgcccgaaggcgcc
accgccaccgacctggtactcacggtcacccagatgctgcgcaagcacggggtggtgggc
aagttcgtggagttctacggtgaaggcctgcagcacctgccgctggccgaccgcgccacc
atcggcaacatggcgccggaatacggtgccacctgcggcatcttcccggtcgataacgaa
tcgctgacctacctgcgcctgtccggccgcagcgaggagcagattgcactagtggaggcc
tatgccaaggcacagggcctgtggcacgacgccgataccccgcatgcgcagtacagcgcc
acgctggagctggacatgggcgacgtcaaaccgtcgctggccggccccaagcgcccgcag
gaccgcgtgctgctggaagacatgcagtccaactaccgcgaaagcctcaagccgttcgcc
gaggcgcgcagcaagcgcttggccgataccaagcaggaagaccggctcaagaacgaaggc
ggcggcggcaccgcggtgggcgccaaggcctcgcaggccgaaagcgctggcgacagcggt
gcgggctggcagctgcgcgatggctcggtggtgatcgcggcgatcacctcgtgcaccaac
acctccaacccggcagtgatgctgggcgccggcctgctcgcccgcaatgccgcggccaag
ggcttgaaggcgcagccctgggtgaagacctcgcttgggccgggctcgcgcgtggtcacc
gactatctgagcaaggccggcgtgctggccgacctggaacaactcggcttctacgtggtg
ggctacggctgcacgacctgcatcggcaactccggcccgctgccggaagacgtctcggcg
gcgattgccaaggatgacctggtggtgacttcggtgttgtcgggcaaccgcaacttcgaa
ggccgcgtgcatcccgaggtcaagatgaactacctcgcctcgccgccgctggtggtggcg
tatgcgatcgccggcaccaccgacatcgacctcacccgcgacccgctcggcaccggcagc
gacggccagccggtgtacctgcgcgacatctggcccagcaacaaggaaatcggcgacacc
atcgccgccaccgtcggcccggaaatgttcaagcagaactacgccgatgtattcaagggc
gatacgcgctggaacaccatcgcctcgccggatggcgcgctgtacgaatgggatgccggg
tccacctacatcaagaacccgccctatttcgaaggcatgacgatgcaggtgggccacgtc
gacgacgtgcatggcgcgcgcatcatgggcttgttcggcgactcgatcaccaccgaccac
atctccccggccggcaacatcaagaaggattcgcccgcgggccgtttcctgcaggagcgc
ggcgtgcagccggccgacttcaacagctacggcagccggcgcggcaacgacgatgtgatg
gtgcgcggcaccttcgccaatattcgcatcaagaacctgatgttcggtggcgaggaaggc
ggcaacacgctgtatttcggcaaggacggcgccacgcctgagaagctggccatctacgac
gcggcgatgaagtacaaggccgacggcgtgccgctggtggtgctggccggcaaggaatac
ggcaccggctcctcgcgtgactgggccgccaagggcaccaacctgctgggcgtcaaggcc
gtggtcgccgaaagcttcgagcgcatccaccgctccaacctggtcggcatgggcgtgctg
ccactgcagttcctggaaggcgaaaatgcgcaaaccctgggcctggatggctccgaggtg
ctggacatcaccggcctgcaggacggcgccagccgtcgcgctaccatcgatgcgaagaag
tccgatggcagcgtcaagcagttccaggtcaaggtgctgctgctgacgccgaaggaagtg
gagtacttcaagcacggcggcctgctgcagtacgtgctgcgccaactagccgcccgcaag
gcagcctga
DBGET
integrated database retrieval system
