Xanthomonas campestris pv. campestris ATCC 33913: XCC2139
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Entry
XCC2139 CDS
T00083
Symbol
edd
Name
(GenBank) 6-phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00030
Pentose phosphate pathway
xcc01100
Metabolic pathways
xcc01120
Microbial metabolism in diverse environments
xcc01200
Carbon metabolism
Module
xcc_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
XCC2139 (edd)
Enzymes [BR:
xcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
XCC2139 (edd)
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AAM41424
UniProt:
Q8P8U5
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All DBs
Position
2523479..2525395
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AA seq
638 aa
AA seq
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MSLHPNIQAVTDRIRKRSAPSRAAYLAGLDAALREGPFRSRLSCGNLAHGFAASEATDKS
RLRGAATPNLGIITAYNDMLSAHQPFEHYPQMIRDTARALGATAQVAGGVPAMCDGVTQG
RAGMELSLFSRDNIAQAAAIGLSHDMFDAVVYLGVCDKIVPGLLIGALAFGHLPALFMPA
GPMSPGIPNKQKAEVRERYAAGEATRAELLEAESASYHSPGTCTFYGTANSNQVLLEAMG
VQLPGASFVNPEQPLRDALTREGTERALAISALGQDFRPFGRLIDERAIVNAVVALMATG
GSTNHTIHWIAVARAAGIVLTWDDMDLISQTVPLLTRVYPNGEADVNRFQAAGGTAFVFR
ELMDAGYMHDDLPTVVEGGMRAYANEPRLQDGKVIYVPGTATSADDSVARPVSDAFESQG
GLRLLRGNLGRSLIKLSAVKPQHRKIEAPAVVIDTPQVLNKLHAAGVLPHDFVVVLRYQG
PRANGMPELHSMAPLLGLLQNQGRRVALVTDGRLSGASGKFPAAIHMTPEAARGGPIGRV
REGDMVRLDGEAGTLEVLVSAEEWASREVAPNTAVAGNDLGRNLFAINRQVVGPADQGAI
SISCGPTHPDGALWSYDAEYELGADAAAAAAPHESKDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcatccgaacatccaagctgtcaccgaccgtatccgcaagcgcagcgcgccc
tcgcgcgcggcgtacctggccggccttgatgccgccctgcgtgaaggcccgttccgtagc
cgcctgagttgcggcaatctcgcgcacggttttgcggcctccgaggcgaccgacaagtcg
cgcctgcgcggcgcggccacgccgaacctgggcatcatcaccgcctacaacgacatgctc
tcggcgcatcagccgttcgagcattacccgcagatgatccgcgacaccgcgcgtgcgctc
ggcgccaccgcgcaggtcgccggcggcgtgccggcaatgtgcgacggcgtgacccagggc
cgtgctggcatggagctgtcgctgttttcgcgcgacaacatcgcccaggccgcggccatc
ggcctcagccacgacatgttcgatgcggtggtctatctgggcgtgtgcgacaagatcgtg
cctggcctgttgatcggcgcattggccttcggccacctgccggcgttgttcatgccggcc
ggcccgatgagcccgggcattcccaacaagcagaaggccgaagtgcgtgagcgctatgcc
gcgggcgaagccacccgtgccgagttgctggaagccgaatccgcctcctaccactcgccc
ggcacctgcaccttttacgggaccgccaactccaatcaggtgttgctggaagcgatgggc
gtgcaactgcccggcgcctcgttcgtcaatcccgaacagccgttgcgtgatgcgctgacc
cgtgagggcaccgagcgggcgctggcgatctccgcgctaggccaggacttccgcccgttc
ggtcgtttgatcgacgaacgcgcgatcgtcaacgccgtggtcgccctgatggccactggc
ggctccaccaaccacaccatccactggatcgctgtggcacgtgcggcgggcatcgtgctg
acctgggacgacatggatctgatctcgcagaccgtgccgctgctgacccgtgtctacccg
aacggcgaagccgacgtgaaccgcttccaggctgctggcggcacggcattcgtgttccgc
gaactgatggacgccggctacatgcacgacgacctgcccaccgtggtcgaaggcggcatg
cgtgcctatgccaacgagccgcgtttgcaggacggcaaggtcatctatgtgcccggcaca
gcgaccagcgccgatgacagcgtggcacgcccggtcagcgatgcattcgaatcgcaaggt
ggcctgcgcctgctgcgcggcaacctgggccgctcgctgatcaagctgtcggcggtcaag
ccccagcaccgcaagatcgaagcgcctgcggtggtgatcgacaccccgcaggtgctcaac
aagctgcatgcggccggcgtgttgccgcatgacttcgtggtggtgctgcgttaccagggc
ccgcgtgccaacggtatgccggagctgcattcaatggccccgttgctcggcctgttgcag
aaccagggccgtcgcgtggcgctggtcaccgacggccgtttgtccggtgcctcgggcaag
ttccccgccgcgatccacatgacgccggaagccgcgcgtggcggcccgatcgggcgtgtc
cgcgaaggcgacatggtgcgcctggacggcgaagccggcacgctggaagtgctggtttcg
gccgaagaatgggcatcgcgcgaggttgcacccaacaccgccgtggccggcaacgacctg
ggccgtaacctgtttgcgatcaaccgccaggtcgtcggcccggccgaccagggcgcgatt
tcgatttcgtgcggcccgacccatccggacggtgcgctgtggagctacgacgccgagtac
gaactgggcgccgatgcggccgctgccgcggcgccgcacgagtccaaggacgcctga
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