Xanthomonas campestris pv. campestris ATCC 33913: XCC2266
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Entry
XCC2266 CDS
T00083
Symbol
pglA
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00040
Pentose and glucuronate interconversions
xcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XCC2266 (pglA)
Enzymes [BR:
xcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
XCC2266 (pglA)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AAM41545
UniProt:
Q8P8H5
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Position
2666405..2668075
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AA seq
556 aa
AA seq
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MQPHPRLPALAPLSLALLGLATFQASAARPHGLDVADTAHSISTSWGVVQQPALPSQVCT
TLKAALVPVAGSLDALDQDPTQSKRDTARLQAAIDDCPAGSAVRLVVGDGGESGLLSGPL
TIKSGVTLWIDRGVTLFGSRNPQDYDNGLGTCGTATTDKAKSCNPLIHVADTAKSAIVGA
GKIDGRGGSTLTAGPNAGKASWWDLAYLNVTKGLSQHVPRLLQIDDSTDFTLYDITLENS
PNFHVTTDNVVGLTAWGIKILAPSLVYSRPGYHCPAGSTPDVNPHASCFTPETAKNTDGF
DPGQSKNVLLAYSYIGTGDDGVAIKAHAKNKRSIASENMLFAYNQFYYTHGFSLGSETDS
GMRHIAVRGLSIDGFNANDVQRDPYSANGLRIKSDASRGGQVYDIRFENICMRGVARPLV
FDANYANPATRDQLPRFSGIALTNVHSLGSKAFGGGELSFYGYRDATTTLPITMSLDNVV
LDGGPVAFAQPHFGGPASNPGAVHFTFKGGPVSFFDQLTESAANDVQLQGRPGPGAPLQC
DDAFIAYHSVLPDSPI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgcaccctcgccttcccgcgctcgcgccactctcgctcgcactcctcggcctt
gccacgtttcaggccagcgcagcacgcccgcatgggctagacgttgccgataccgcgcac
agcatctccaccagttggggtgtcgtgcagcagcccgcgctccccagccaggtctgcaca
acgctcaaggctgcgctggtgccggttgccggctcgctggatgcgctcgaccaggatccc
acccaatccaaacgcgacaccgcacgcctgcaggccgccatcgacgattgccctgccggc
agcgcggtgcgtctggtggtcggcgatggcggagaatccggcctgttgagcggcccgctc
accatcaagagcggcgtgacgttgtggatcgatcgcggcgtgaccttgttcggctcgcgc
aatccgcaggattacgacaatggcctgggcacctgcggcaccgccaccaccgacaaggcc
aagtcctgcaacccgttgatccacgtcgccgacactgccaagagcgccatcgtgggcgcc
ggcaagatcgacggccgcggtggcagcacgctcaccgcgggaccgaatgccggcaaggcc
agctggtgggatctggcctatctcaacgtcaccaagggcctgagccagcacgtgccacgg
ctgctgcagatcgatgacagcaccgacttcacgctgtacgacatcaccctggaaaactcg
cccaatttccacgtcaccaccgacaacgtggtgggcctgaccgcctggggcatcaagatc
ctggcacctagcctggtgtattcgcgccccggctaccactgccctgccggcagcaccccg
gacgtcaatccgcacgccagctgcttcaccccggaaaccgccaagaacaccgacggcttc
gaccctggccaatccaagaacgtgctgctggcgtactcgtatatcggtaccggcgatgac
ggcgtggcgatcaaggcgcatgccaaaaacaagcgcagcatcgcctcggaaaacatgctg
ttcgcctacaaccagttctactacacgcacggtttttcgctcggcagcgaaaccgattcg
gggatgcgccatatcgccgtgcgcggcttgagcatcgacggcttcaacgccaacgacgtg
cagcgcgatccctactcggccaatggcctgcgtatcaagtccgatgcttcgcgcggcggc
caggtctacgacatcagattcgagaacatctgcatgcgcggggttgcgcggccgctggta
ttcgacgccaactacgccaacccggccacacgcgaccagttgccgcggttcagcggcatt
gcactgaccaatgtgcactccctgggttccaaggccttcggtggcggcgaattgagcttc
tacggctatcgcgatgcgaccaccaccctgcccatcaccatgtcgctggacaacgtggtg
ctcgacggcggcccggtcgcctttgcgcagccgcattttggtggaccggccagcaacccg
ggcgcggtgcacttcaccttcaaaggcgggccggtgagcttctttgatcagctcaccgag
tcggcggccaacgatgtgcagttgcagggccggcccgggccgggcgcgccgttgcaatgc
gacgatgccttcattgcgtaccacagcgtgctgcccgactcaccgatctaa
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