Xanthomonas campestris pv. campestris ATCC 33913: XCC2328
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Entry
XCC2328 CDS
T00083
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcc03016
]
XCC2328
Enzymes [BR:
xcc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
XCC2328
Transfer RNA biogenesis [BR:
xcc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
XCC2328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AAM41606
UniProt:
Q8P8B5
LinkDB
All DBs
Position
2735233..2736690
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AA seq
485 aa
AA seq
DB search
MPGTSVSDLPTTATAVDAPALLPLPVGRPQAPALVRGKLYIKTHGCQMNEYDSAKMADVL
AASEGLELTDNPEDADVVLVNTCSIREKAQEKVFSQLGRWKALKAGGKPVIIGVGGCVAS
QEGEAIVKRAPYVDLVFGPQTLHRLPELIRARRESGKSQVDISFPEIEKFDRLPEPRADG
PSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAY
RGAYGADAGEPAQYADLGLLIRTIAQIDGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANY
LHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFDKT
MKLIEDVGFDQSFSFIYSRRPGTPASDLEDDTPDAVKQARLARLQAHINAHAAGISQRMV
GSVQRVLVEGPSRRDANELTGKTENMRPVNFPGNPRLVGQFVDVLITEALSNSLRGRIQL
DDSAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggacatccgtttccgatctgccgaccacggccaccgccgtggacgcgcccgcc
ctgctgcccctgcccgttggccgcccgcaagcgcctgccctggtgcgcggcaagctgtac
atcaagacccacgggtgccagatgaacgagtacgactcggccaagatggccgacgtgctt
gccgcgtccgaaggactggagctcaccgacaatccggaagacgcggacgtggtgctggtc
aacacctgctccattcgcgaaaaggcgcaggaaaaggtgttcagccagttgggccgctgg
aaggcgctcaaggccggcggcaagccggtgatcatcggcgtgggtggctgcgtggcgtcg
caggaaggcgaagcgatcgtcaagcgcgcgccgtacgtggacctggtgtttggcccgcag
accctgcaccggctgccggagttgatccgtgcgcgccgtgagtccggcaagtcgcaggtg
gacatcagcttcccggagatcgagaagttcgaccgcctgcccgaaccgcgtgccgatggc
ccgtcggcgttcgtgtcgatcatggaaggttgttccaagtactgctcgttctgcgtggtg
ccatatacacgtggcgaagaagtcagccggccgttcgaggacgtgctggtggaagtggcg
cagctggctgcacaaggcgtgcgcgagatcaatctgctcggccagaacgtcaacgcgtat
cgcggtgcgtacggtgccgatgctggcgagccggcgcagtacgccgatctggggttgctg
atccgtaccattgcgcagatcgacgggattggccggatccgctttaccacctcgcacccg
ctggagttttccgattcgctggtcgatgcctaccgcgatgtgccgcagctggccaattac
ctgcatctgccggtgcaggccggcagcgaccgcatcctgtcggcgatgaagcgcggctac
accgcactggaattcaagtccaagatccgcaagctgcgcgcagtgcggccagacatctcg
atcagctccgacttcatcgtcggctttccgggcgagaccgacgccgatttcgacaagacc
atgaagttgatcgaggacgtgggcttcgaccagagcttctcctttatctactcgcgtcgc
cccggtacgccggcatcggatctggaagacgacacccccgatgcggtgaagcaggctcgc
cttgcacgtctgcaggcgcatatcaacgcgcatgccgccggcatttcgcaacgcatggtc
ggcagcgtgcaacgcgtgctggtggaaggcccgtcgcgccgtgatgccaatgagctcacc
ggcaagaccgaaaacatgcgcccggtgaatttcccggggaatccgcgcctggtgggccag
ttcgtggatgtgctgatcaccgaagcactgagcaattcgctgcgcgggcgcatccaattg
gacgacagcgcggcctga
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