Xanthomonas campestris pv. campestris ATCC 33913: XCC2485
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Entry
XCC2485 CDS
T00083
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XCC2485 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcc03400
]
XCC2485 (uvrB)
DNA repair and recombination proteins [BR:
xcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XCC2485 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XCC2485 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
AAM41760
UniProt:
Q8P7X1
LinkDB
All DBs
Position
complement(2954983..2957004)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFELVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLID
PVVEIRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEGA
REDAAEKKAGKGRSKSRQVAEEPADYRAMGPAEIAGKLKALEQKMYQHAKDLEFEAAAQI
RDQILKLKAASLA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgctttgagcttgtatccccgtattccccagccggcgaccaacctgcggcc
atcgacaagttggtggccaacttcgaggcggggctggccaagcagacgctgctgggggtg
acgggttcgggtaagacctacaccatcgccaacgtcgtgcagcaggtgcagaagccgacg
ctagtgatggcgccgaacaagacgttggcggcgcagctgtacggcgagttcaagtcgttt
ttcccgaacaacgcggtggagtacttcgtcagctattacgactattaccagcctgaagca
tacgtgccgtcgtcggacaccttcatcgagaaggacagctcgatcaacgagcacatcgag
cagatgcgtctgtcggcgaccaagacgctgctgtcgcggcgcgactcgctggtggtggcc
acggtttcggcgatctacggcctcggcgcgccagaagactatctgtcgctgcgcctgatt
ctctcgatcggcgagcacatcgatcagcgccagctgatccgccatctcaccgatctgcag
tacacgcgcaacgagttcgagctcacgcgcggcgcgttccgtgtgcgcggcgaggtgctt
gacgtttttcccgccgagtcggataccgaggcgttgcgcatcgaactgttcgatggcgac
atcgagcaactgacgctgttcgatccgctgaccggcgagacgctgcgcaagctgcagcgt
tacaccgtgtatcccaagacccattacgccaccacgcgcgagcgcaccttgagcgcggtc
gacaccatcaaagaagagttgaaggagcgcttggagcagttgtattcgcagaacaagctg
gtggaggcgcagcgcctggcgcaacgcacccagttcgatctggagatgatggccgaggtg
ggcttctgtaacggcatcgagaactactcgcggcacttgaccggcaaggcgcctggcgag
ccgccgccgaccttgttcgactacttgccgccggatgcgctgctggtgatcgacgagtcg
cacgtgaccattccgcagatcggcgcaatgtacaagggcgaccgctcgcgcaaggaaacg
ctggtggaattcggcttccgcctgccgtcggcgctggacaatcgcccgttgcgctttgag
gaatgggaagcgcgttcgccgcgtagcatctatgtgtcggcaacaccggggccgtacgag
ctgcgcgaatctgctggcgagatcaccgagctggtggtgcggcctaccggcttgatcgac
ccggtggtcgagatccgcccggtaggcacacaggtcgacgatctgatgtccgaggtgcac
gagcgcatcaagctgggcgaccgcgtgctggtcaccactttgaccaagcgtatggccgaa
aacctcaccgaatacctcggtgagcacggcatccgcgtgcgctatctgcactcggacatc
gacaccgtagagcgcgtagagatcatccgcgacctgcgccttggcaagttcgacgtactg
gtcggcatcaatctattgcgcgaaggcctggacatgccggaggtgtcgctggttgcgatc
ctggacgcagacaaggaaggcttcctgcgctccaccggctcgctgatccagaccatcggg
cgcgcggcgcgcaacctgcgcggcaaggcgatcctctatgccgacaagatgacgcgttcg
atgcaggcggccatcgacgagactgaccgccggcgcgagaagcaggttgagtacaacctt
gagcacggcatcaccccgaagtcggtcgcgcggccgatctccgacatcatggaaggcgcg
cgcgaagacgcggccgagaagaaggctggcaaggggcgctcgaagtcgcgccaggtggcc
gaggagcccgccgactatcgcgcgatggggcctgccgaaattgccggcaagctcaaggca
ctcgagcagaagatgtaccagcacgccaaggatctggaattcgaagcggcggcgcagatc
cgcgaccagatcctgaagctcaaggcggccagcctcgcgtga
DBGET
integrated database retrieval system
