Xanthomonas campestris pv. campestris ATCC 33913: XCC2564
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Entry
XCC2564 CDS
T00083
Name
(GenBank) conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcc03009
]
XCC2564
Enzymes [BR:
xcc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
XCC2564
Ribosome biogenesis [BR:
xcc03009
]
Prokaryotic type
ribosomal protein modification factors
XCC2564
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AAM41836
UniProt:
Q8P7P7
LinkDB
All DBs
Position
complement(3040457..3041830)
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AA seq
457 aa
AA seq
DB search
MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTE
SLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLASRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTRLHYVYPYPH
VDDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAMCPEITVRST
FIVGFPGETDAEFEALLEFLDQAQLDRVGAFAYSPVEGASANALPDPVPEELKQERLARF
MARQAEISAARLEAKIGSVQQCLVDLIEDDIAVARSRADAPEIDGLVHIQNGGELKLKVG
DLVDVEITDSDEHDLFGDALPSDPAAQPPRALNLQMV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggcgctcgtc
gattccgaacgcatcctcacccagctacgcgtggagggctacgacatcgtgcccagttac
gacgccgccgacgtggtggtggtcaatacctgtggcttcatcgattcggcggtgaccgag
tcgctggatgcgatcggcgaggcgatgaacgccaacggcaaggtgatcgtcaccggctgc
ctgggcaagcgcccggagcagatccgcgaggcctacccgcaggtgctggcggtctccggc
ccgcaggactaccagagcgtgatggaggcggtgcacgctgcgctgccgccgcgccacgat
ccgttcgtggatctggtgccggactacggcatcaagctgacgccgcgccactacgcatac
ctgaagatttccgaaggctgcaatcaccgctgcagtttctgcatcattccttccatgcgc
ggcgacctggcctcgcgcccggtcgacgaggtgctgcgtgaggccgagcggctggtgcgc
ggcggcgtcaaggagctgctggtggtctcgcaggacacctcggcctacggcgtggacctg
aagtatgccgagcgcccgtggcgcgaccgcatgtaccagacccgcatgaaggcgctgtgc
gaaggcttgtcggaactgggcgtgtggacgcgcctgcattacgtgtacccgtacccgcac
gtggacgatgtgattccgctgatggccgaaggcaagctgctgccgtacctggacatcccg
ttccagcacgccagcccgcgcatcctcaagctgatgaagcggccgggcgcagtggaaaag
accctggagcgcgtgcagcgctggaaggcgatgtgcccggagatcacggtgcgctcgacc
ttcatcgtcggcttccccggcgagaccgatgccgagttcgaagcgctgctggagtttctg
gatcaggcgcagttggatcgcgtcggggcgtttgcgtattcgccggtggagggcgctagc
gccaacgcattgccggacccggtgccggaagaactgaagcaggagcgtctggcgcgcttc
atggccaggcaggcggagatttccgcggcgcggctggaagccaagatcggcagcgtgcag
caatgcctggtcgacctgatcgaagacgatatcgcggtggcccgttcgcgtgcagacgcg
ccggagatcgacggcctggtgcatatccagaacggcggcgagctcaagttgaaggtgggc
gacctggtcgatgtggaaatcaccgacagcgacgagcacgacctgttcggtgatgcgctg
ccgtctgatcctgcggcgcagccgccccgcgcattgaacctgcagatggtctag
DBGET
integrated database retrieval system
