Xanthomonas campestris pv. campestris ATCC 33913: XCC2802
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Entry
XCC2802 CDS
T00083
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc02020
Two-component system
xcc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XCC2802 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XCC2802 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcc03021
]
XCC2802 (rpoN)
Transcription machinery [BR:
xcc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XCC2802 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_38
HTH_IclR
Sigma70_r4
HTH_23
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AAM42074
UniProt:
Q8P712
LinkDB
All DBs
Position
3307871..3309307
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AA seq
478 aa
AA seq
DB search
MKARLQTSLGQQLVMTPQLRQAIKLLQMSTTELEVEIAEAVETNPLLEWADEAAHAASEA
PVEPSPSASNEERQRDEPAPAERDDDWSQDELQWTGTGSGGSFDDDDNGDAAERVAESET
LADHLLWQLHLSPLSPRDRQIGAILIDALDEDGYLREPLSAILETLNLGNVDEAEVLTVL
HQIQRFDPVGIGARSLGECLALQLQVLDAATPARELALQIVAGPLERLPRSGIAGLAHEL
KRSAADVEQAVQLVRSLDPRPGKQISALSQDTYVVPDCVIWRQRGVWRAALAGRAQPKVT
IHRGYEQLIRSCGESDAGYLRGQLQEARWLLKSLEARGETLLRVVRCLLQHQAGFLEFGA
QALRPLTLREIAGELGLHESTISRAIARKYVRTPRGTIPLRSFFASGIDTDSGGEASSTA
IQAMIRRLIDAENPRKPLSDAKLADLLKTSGVPVARRTVAKYREAMNISASHERVRIA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccggctccagacatcgttaggacagcagttggtcatgacgccgcaattgcgt
caggcgatcaaactattgcagatgtccaccaccgagctggaagtggaaatcgccgaagcg
gtggagaccaatccactgctggagtgggccgacgaagccgcgcacgcggccagcgaggcg
ccggtcgaaccgtcgccctccgcctccaacgaagaacgccaacgcgacgagccggcgcct
gccgagcgcgacgacgactggtcgcaggacgagctgcaatggaccggcactggcagtggc
ggcagcttcgacgatgacgacaacggcgacgccgccgaacgcgtggccgagtccgaaacc
ctggccgaccacctgttgtggcagttgcacctgtcaccgctgtcgccaagggaccgccag
atcggcgcgatcctgatcgatgccctggacgaagacggctacctgcgcgagccgctcagc
gcgattctggagacgctcaacctcggcaacgtggacgaggccgaagtgctcaccgtgctg
caccagatccagcgcttcgacccggtgggcatcggcgcacgctcgctgggcgaatgtctg
gcgctgcagctgcaggtgctcgatgcggcgacgcctgcgcgcgagctggcgctgcagatc
gtggccgggccgctggagcggctgccgcgcagcggcattgccggcctggcccacgaactc
aagcgctctgccgccgatgtcgagcaggccgtgcagctggtgcgctcgctggacccgcgc
ccgggcaagcagatcagcgcgctgtcgcaggacacctatgtggtgccggactgtgtgatc
tggcgccagcgcggcgtctggcgcgccgccctggccggccgcgcgcaacccaaggtgacc
atccaccgcggctacgagcaactgatccgcagctgcggcgaatccgacgccggctacctg
cgtggccaactgcaggaagcgcgctggctgctcaagagcctggaggcgcgcggcgaaacc
ctgctgcgggtggtgcgctgcctgctgcagcaccaggccgggttcctggagttcggtgcg
caggcgctgcgcccgctgaccctgcgcgagatcgccggtgagttgggcctgcacgaatcg
acgatttcgcgtgccatcgcccgcaagtacgtacgcacgccgcgcggcaccatcccgctg
cgctcgttctttgcctccggcatcgacaccgacagcggcggcgaggcctccagcacggcg
atccaggcgatgatccggcgcctgatcgatgcggaaaacccgcgcaaacccttgtcggac
gccaagttggcagatctgttgaaaacttccggcgtaccagtagcgcgccgaaccgttgcg
aagtatcgtgaggccatgaacatttccgcctcccacgaacgcgtgcgcatcgcctga
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