Xanthomonas campestris pv. campestris ATCC 33913: XCC2947
Help
Entry
XCC2947 CDS
T00083
Symbol
recQ
Name
(GenBank) DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XCC2947 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcc03019
]
XCC2947 (recQ)
03400 DNA repair and recombination proteins [BR:
xcc03400
]
XCC2947 (recQ)
Enzymes [BR:
xcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XCC2947 (recQ)
Messenger RNA biogenesis [BR:
xcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XCC2947 (recQ)
DNA repair and recombination proteins [BR:
xcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XCC2947 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAM42219
UniProt:
Q8P6M0
LinkDB
All DBs
Position
3507580..3509382
Genome browser
AA seq
600 aa
AA seq
DB search
MSSPAHELLSRVFGYDDFRGPQQAIVEHVAAGNDALVLMPTGGGKSLCYQVPALLRDGIG
IVVSPLIALMQDQVEALRQLGVRAEFLNSTLDAENTQRVERALLSGDLDLLYVAPERLLT
PRFLSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHIPRMALTATADPPT
QREIAERLDLVEARHFVSSFDRPNIRYTVVQKDNARKQLQEFLGRHRGSAGIVYAMSRRK
VEETAQQLCAQGFNALPYHAGLPAEVRAENQRRFLREDGIIMAATIAFGMGIDKPDVRFV
AHVDLPKSMEGYYQETGRAGRDGEPAEAWLCYGLGDVVLLKQMIEQGEAAEERKRLERAK
LDHLLGYCESMQCRRQVLLAGFGETYPKPCGNCDNCLTPAAAWDATVASQKALSCVYRSG
QRFGVGHLIDILRGSENERIKQLGHDQLSTYGIGRDMDERTWRGVFRQLVAASLLEVDSE
GHGGLRLTDASRQVLKGERQVMMRRENPAAGRERDRGAQRTGLPVQPQDLGLFNALRGLR
AELAKEQNVPAFVIFHDSTLRNIAEQRPTSIDALSRVGGIGGGKLARYGAQLIEIVREQG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccccgcacacgaactgctcagccgcgtcttcggttacgacgatttccgcggc
ccccagcaagccattgtcgaacacgtcgccgccggcaacgacgcgctggttctgatgccc
accggtggcggcaagtcgctgtgctaccaggtcccggcgctgttgcgcgacggcatcggc
atcgtggtgtcgccgctgatcgccctgatgcaggaccaggtggaagccctgcgccagctc
ggggtgcgcgccgaattcctcaactccaccctggatgcggaaaacacccagcgggtggaa
cgcgccctgctctcgggcgatctggacctgctgtacgtcgcaccggaacgactgctcacc
ccgcgcttcctgtcgctgctggaacgtagccgcatcgccttgttcgccatcgacgaagcg
cactgcgtgtcgcagtggggccacgacttccgcccggagtaccgccagctcaccgtactg
cacgagcgttggccacacattccgcggatggcattgacggcaaccgccgacccgcccacc
caacgcgagatcgccgagcgcctggacctggtggaggcgcgccacttcgtcagctcgttc
gaccgccccaacatccgctacaccgtggtgcagaaggacaacgcgcgcaagcagctgcag
gagttcctgggccgccaccgcggctcggccggcatcgtctatgcgatgtcgcggcgcaaa
gtggaagaaaccgcgcaacagctgtgtgcgcaaggcttcaatgccctgccctaccacgcc
ggcctgccggcggaagtgcgcgcggagaaccagcgccgcttcctgcgcgaggacggcatc
atcatggccgccacgatcgccttcggcatgggcatcgacaagccagacgtgcggttcgtg
gcgcacgtggacctgcccaaatcgatggaaggctattaccaggaaaccgggcgtgccggc
cgcgatggcgagcccgccgaggcatggctctgctatggcctgggcgatgtggtgctgctc
aagcagatgatcgaacagggcgaggccgccgaagagcgcaagcgcctggaacgcgccaag
ctcgatcacctgctgggctactgcgagtccatgcagtgccgccgccaggtgctgctggcc
ggcttcggcgaaacctatcccaagccctgcggcaactgcgacaactgcctgaccccggcc
gccgcctgggacgccaccgtggcctcgcagaaggcgctgagctgcgtgtatcgcagcggg
cagcgcttcggtgtgggccatctgatcgacatcctgcgcggcagcgagaacgagcgcatc
aagcagctcggccacgaccagctgagcacctacggcatcggccgcgacatggacgagcgt
acctggcgcggggtgttccgccagctggtggctgccagcctgctggaagtcgacagcgaa
ggccacggcggcctgcgcctcaccgatgccagtcgccaggtactcaagggcgagcgccag
gtgatgatgcggcgcgaaaacccggctgccgggcgagagcgcgaccgcggcgcgcaacgc
accgggctgccggtgcagccgcaggatctggggctgttcaacgccttgcgcggcctgcgc
gcggaactggccaaggagcagaacgtgccggccttcgtgatcttccacgacagcacactg
cgcaatatcgccgaacaacggcccaccagcatcgatgccctctcgcgtgtgggcggcatc
ggcggcggcaagctggcccgttacggtgcgcaactgatcgagatcgtgcgcgaacagggc
tga
DBGET
integrated database retrieval system
