Xanthomonas campestris pv. campestris ATCC 33913: XCC3055
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Entry
XCC3055 CDS
T00083
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00300
Lysine biosynthesis
xcc00470
D-Amino acid metabolism
xcc01100
Metabolic pathways
xcc01110
Biosynthesis of secondary metabolites
xcc01120
Microbial metabolism in diverse environments
xcc01230
Biosynthesis of amino acids
Module
xcc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XCC3055 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCC3055 (lysA)
Enzymes [BR:
xcc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XCC3055 (lysA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
NCAB2
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
AAM42326
UniProt:
Q8P6B5
LinkDB
All DBs
Position
3617156..3618439
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AA seq
427 aa
AA seq
DB search
MSLQIDATAVRAAVAQLRAHSDAPLCAYVYDLAALDAHAAWMRAQLPPGCTLFYAAKANA
EPQILQTLAPYVDGFEAASGGELAWLHQQQPDAALLFGGPGKLESELAQAVRLPDCTVHV
ESLGELQRLAAIARQIAQPDRRRIPVFLRMNIAVPGAQTTRLMMGGQPSPFGLDPDDLDA
ALLQLRASPALELRGFHFHLMSHQRDAAAQLHLIAAYLRTVQHWRQRHGLGPLLVNAGGG
FGVDYLTPEASFDWAGFCAGLPAVLHAHGDGLQLRLEPGRYVSASCGWYLMEVLDIKRSH
GAWFAIARGGTHHFRTPAAQGHDHPCVVVRGTHAPVLRDTPVTLVGQLCTPKDVLARNQR
VAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLPVHAQATATTGTRMSARRSASA
TVSGSSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcagatcgatgccacggcggtgcgcgcagcggtggcgcagttacgtgcgcac
agcgacgccccgctatgtgcgtacgtctacgacctggccgcactggatgcgcacgcagca
tggatgcgtgcgcagctgccgcccggctgcacgctgttctacgccgccaaggccaatgcc
gaaccgcagatcctgcagacgctggcgccgtacgtggatgggttcgaagccgcatccggt
ggcgagctcgcctggctgcaccagcagcaaccggatgcggcgttgctgtttggtgggccg
ggcaaactggagagcgaactggcgcaggccgtgcgcctgcccgactgcaccgtgcatgtg
gaaagcctgggcgaattgcagcggctggcggccattgcgcgacagatcgcccagcccgac
cgccggcgcatcccggtgttcctgcgcatgaacatcgccgtgcccggtgcacagaccacg
cgtttgatgatgggcggccaaccatcgccattcgggctggacccggacgacctggatgct
gcgctgctgcagctacgcgccagcccggcactggagttgcgcggcttccatttccacctg
atgtcgcaccaacgcgacgccgccgcgcagctgcacctgatcgcggcgtatctgcgcacc
gtgcagcactggcggcagcgccatggcctgggcccgctgctggtcaatgccggcggcggc
ttcggcgtggactatctgacgccagaggcctcgttcgactgggcaggcttctgcgccggg
ctgcccgcggtgctgcacgcgcacggcgacggcctgcaactgcgcctggaaccgggccgc
tatgtcagcgccagctgcggctggtacctgatggaggtgctggacatcaagcgcagccac
ggcgcgtggtttgcgattgcccgtggcggcacccatcacttccgcacgccggccgcgcaa
ggccacgaccatccctgcgtggtggtacgcggcacacatgcaccggtgctgcgcgacacc
ccggtcaccctggtcggccagctctgcacgcccaaggatgtactggcccgcaatcagcgc
gttgcagcgctcgctcccggcgactgcctggccttcccgctggcgggtgcgtatgcgtgg
aatatttcgcatcagcagttcctgatgcacccgccaccgcagatggtgtttttgccggta
cacgctcaggcaaccgccaccaccggcacgcggatgtcggcgcgcaggtcggcttcggcc
acggtctcggggtcgtcgaggtag
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