Xanthomonas campestris pv. campestris ATCC 33913: XCC4020
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Entry
XCC4020 CDS
T00083
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc03030
DNA replication
xcc03410
Base excision repair
xcc03420
Nucleotide excision repair
xcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XCC4020 (polA)
03410 Base excision repair
XCC4020 (polA)
03420 Nucleotide excision repair
XCC4020 (polA)
03440 Homologous recombination
XCC4020 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcc03032
]
XCC4020 (polA)
03400 DNA repair and recombination proteins [BR:
xcc03400
]
XCC4020 (polA)
Enzymes [BR:
xcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XCC4020 (polA)
DNA replication proteins [BR:
xcc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XCC4020 (polA)
DNA repair and recombination proteins [BR:
xcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XCC4020 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XCC4020 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Terminase_6
Motif
Other DBs
NCBI-ProteinID:
AAM43241
UniProt:
Q8P3P9
LinkDB
All DBs
Position
complement(4765994..4768777)
Genome browser
AA seq
927 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYVAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGA
SDGLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNRELVTI
KTDVVLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAEAGGLTAPMAVARTEP
GRARGTGFVSAPAAAPVELDPALSAPGQYETILTQAQLDSWIARLRAAGQFAFDTETDSL
DALQANLIGLSVAAEPGQAAYLPFGHDFPGAPAQLDRTQALAQLAPLLTDPAVRKLGQHG
KYDLHVMRRHGIALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYEDICGKGA
KQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVYRDIEMPLVGVLERIE
ANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVK
TPKGQPSTNEEALEAIADQHELPRVILDYRSLAKLRSTYTDKLPEMIHPQSGRVHTSYHQ
AGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIMAHLSGDP
GLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGIGR
GEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGAER
AAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFEADADFVDTLLAEVT
ARMSAAASLRVPLVVDSGVGDNWDEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggtgcgttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggaacgcccggcctatgtggcgttcgtggtggatgcgcccggc
aagacatttcgtgatgacttgtatgccgactacaaggccaatcgcccgtcgatgcccgac
gacctgcgtgcacaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggtgtggaagcggacgatgtgatcggcacgctggcgctgcaaggcgcc
agcgacggcttggccgtcaccatctccaccggcgacaaggacttcgcgcagctggtgcgc
ccgggcgtggaactggtcaacaccatgagcggcagccgcatggattcggacgaggcggtg
atcgccaaattcggcgtgcgcccgaaccagatcgtcgacctgctggcgctgatgggcgac
accgtcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgacggcgtgatcgccaatgccgacaagatcaagggcaagatc
ggcgagaacctgcgcgccgccttgccgcggctgccgctcaatcgcgagctggtcaccatc
aagaccgacgtggtgctggccagcggtccgcgcgcgctggacctgcgcgaacccaacgcc
gaagcgctggcggtgctgtacgcgcgctacggcttcacccaggcgctgcgcgaactcggc
ggcgccgccgccgaggccggcgggctgaccgcaccgatggcggtggcgcgcaccgagcct
ggccgcgcacgcggcaccggcttcgtgtcggcgccggctgccgctccggtggagctggac
ccggcgctgtcggcgcccggccagtacgagaccatcctcacccaggcgcagctcgacagc
tggatcgcgcggctgcgcgcggccgggcagttcgccttcgataccgaaaccgacagcctg
gacgcgctgcaggccaacctgatcggcctcagcgtcgccgccgagcccggccaggccgcc
tacctgccgttcggccacgatttccccggcgcaccggcccagctcgaccgcacgcaggcg
ctggcgcagctggcgccgctgctgaccgacccggcggtgcgcaagctcggccagcacggc
aagtacgacctgcacgtgatgcgccgccacggcatcgccctggccggctacgccgacgac
accctgctggagagcttcgtgctcaactccggcagtgcccgccacgacatggacagcctg
gccaagcgttacctgggctacgacaccgtcaagtacgaagacatctgcggcaagggcgcc
aagcagatcaagttcgcccaggtcagcctggaagacgccacccgctacgccgccgaagac
gccgacatcaccctgcgcctgcaccaggtgctgggcaagcgcctggccgccgagccggcg
ctggagagtgtctaccgcgacatcgaaatgccgctggtgggcgtgctggagcgcatcgag
gccaacggcgtgtgcgtggacgcagccgagctgcgccgccagagcgcggacctgtccaag
cgcatgctcgccgcccagcagaaggccaccgaactggccgggcgcaccttcaacctggac
tcgcccaaacagctgcaggcgctgctgttcgacgagctcaagctgcccgccgtggtcaag
acgcccaagggccagccctcgaccaacgaagaagccctggaagccatcgccgaccagcac
gagctgccgcgggtgatcctggactaccgcagcctggccaaactgcgcagcacctacacc
gacaagctgccggagatgatccacccgcagtccgggcgcgtgcacaccagctaccaccag
gccggcgcggccaccgggcggttgtcttcgtccgaccccaacctgcagaacatcccgatc
cgcaccgaagacggccgccgcatccgccgcgcctttgtcgccccggccggacgcaagctg
atcgcctgcgactactcgcagatcgagctgcgcatcatggcccacctgtccggcgacccc
ggcctggtcggcgcattcgaatccggcgccgacgtgcaccgtgccaccgccgccgaagtg
ttcggccgcaccatcgatacggtcagcggggatgagcgccgcgccgccaaggcgatcaac
ttcggcctgatgtacggcatgagtgcgttcggcctggcccgccagctcggcatcggccgt
ggcgaggcgcaggactacatcgcgctgtacttcagccgttacccgggcgtgcgtgacttc
atggaaaccacccggcagcaggcccgcgacaagggctacgtggaaaccgtgttcggccgc
cggctgtatctggacttcatcaacgccggcagccagggccaacgcgccggcgccgagcgc
gcggccatcaacgcgccgatgcagggcaccgccgccgacatcatcaagcgcgccatggtc
agcgtggatggctggattgccgatcacgcgcagcgcgccctgatgatcctgcaggtgcac
gacgaactggtgttcgaggccgacgccgacttcgtcgacacgctgctggccgaggtcacc
gcgcgcatgtctgcggccgccagcctgcgcgtgccgctggtggtcgattcgggcgtgggc
gataactgggacgaggcgcattga
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